K16136

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	increased size (PATO:0000586) (Seed::Shape::large) increased length (PATO:0000573) (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K16136

Determination of introduced cDNA(s)

J033046A07 - Rice Full-length cDNAs - Original: J033046A07

full reading [+] show sequence

GAGGCTACCA CGCGAGAAGC GAACGCGACC CGGCCACCAC CACACCTCTC 
CTCCAGCTCG CGGTCTCCTC CTCCTCGGCT CCTCCCAAAA AAGAGCTCTA 
GAATAAAAGA GAAGGGGAAA CCCCCCCCCC AAATCCCACG CCGCTCGGCT 
CACCGAGTGC TGCATCGGAT CGGATCGGGA CGGCGGTGGC GGACGCGAGA 
TGTGGGAGTC GGTGGCGCTC ACGCTGGCCG GCGCCGCCGG AAACAACGTC 
GGCAAGGTCC TCCAGAAGAA GGGCACCCAC ATCCTCCCTC CCCTCTCCTT 
CAAGCTCAAG GTGATTAGGG CGTACGCGTT GAACAGGCTC TGGATCAGCG 
GATTCCTCAT GGACATGTGC GGCGCCGCGC TCATGCTCAC CGCGCTCTCG 
CAGGCGCCGG TCTCCGTCGT GCAGCCGATC GCCGGCTGTG GCCTCGCCAT 
ACTCTGCGTG TTCTCCCATT TCTACCTCAA GGAGTCCATG AACGGGCTCG 
ACTGGGTCGC CATCACATTG GCCGGTCTAG GCACGATAGG AGTTGGTGTT 
GGAGGCGAGG AGCAGAAAGT GGACAAAATT CCACTGTTCA ATATACCTTG 
GCTGGTGCTC TCCATTGTCA TCTTGTTTGT AGGTTCTTCT CAACACTTGG 
CTTCATATCT ACAAAAGGCA AAGGCGTGAA CAAGAGTTGA CTGGACCTGA 
AGTGATCGAG GAGATCATAT ATGGATTGGA ATCTGGCATT CTGTTTGGGA 
TTTCATCAGT GATATCTAAG ACAGGATTCG TGATGTCTGA AATGGGTTTT 
CCAAAGATTG TTGTACCGGC TGCCATTTCT TGTAGTGTGG GCTGCAGTGC 
TGTGGGATTT GTTTATCAGA CTCGAGGTCT GAAGCATGGA AGGGCAATTG 
TTGTGTCCAC TTGTACATCA GTTGCATCTA TTGTGTCTGG CGTTGTAGCT 
GGTATGATTG CGCTTGATGA ACATCTTCCC ACAGCTCCCA CGGGCCGCTT 
TTTTCTCTTA CTTGGATGGT TCTTCATTAT TACAGGAGTG ATACTTCTTG 
TTAGTTCAAC CCGGATAATT GCTCGGCTAC CCAGATCTAT GCAGAAGTTT 
TTGAAGAGTA ATGTGGAGCG TACCCACAGC ATCAGGAGGC CTAGCTCAGC 
GCGAGGAAAG GACCCCATCC CAAGCACAAC AATCCATGCA TCCACATTGC 
ATCTGCTAAC ATCTCCATCG AAAGAGAAGG CCTAGAAAAA GTTCCTGCTG 
GAGCAAGATT GTTTTGGCAC CTCAAATGTG CCATGTTGTT TAATTGACTC 
CTGATGTGAA TGTAAAGTCT AGAGTAGCAT CTTTAAAGTT TGGGTTGGTG 
ATATCGTATA CTGCTTGTCT GCTCTTATTG ATCTATACAG CCTCTTTGGA 
AAACTTAACC TTGC

Gene models with high sequence identity

AT5G11960.1 [+] show detail - Protein of unknown function (DUF803)
E-value: 2e-103; Score: 173.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Protein of unknown function DUF803	1.4e-07
superfamily	Multidrug resistance efflux transporter EmrE	2.5e-08

See the detailed result >

AT5G11960.1

Model type: Protein coding
Short Description: Protein of unknown function (DUF803)
Computational Description: Protein of unknown function (DUF803); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF803 (InterPro:IPR008521); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR