K16504

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K16504

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K16504

Determination of introduced cDNA(s)

  • J033109P13 - Rice Full-length cDNAs - Original: J033109P13

    full reading [+] show sequence

    Nucleotide sequence: J033109P13 - full reading 
    TCTTGGCAGG CGTGCTGAAT CTATGGTCTT GCCCTTAGAA TTCCTACAGC 
    AGTTCAAGGC ATCAGATATC CCTGATCCTC AAGAGTACGA GGCATGGCAG 
    AGTAGGAACT TGAAGCTTCT TGAGGCTGGT TTGCTTGTTC ACCCACTTGT 
    TCCATTGAAC AAATCAGATG TTTCTGCACA ACGACTGCGG CAAATTATAC 
    GTGGAGCATA CGATAGACCA CTTGAAACTG GGAAAAACTC TGAGTCAATG 
    CAGGTCCTAC GTAGTGCTGT CATGTCCCTT GCTGGTAGGT CTGATGATGG 
    GACTTCTGAC GGATGCCACT GGGCTGATGG TTTCCCCTTG AATCTCCATC 
    TATACCAGAT GTTGGTAGAA GCTTGCTTTG ATAATGATGA TGGCACTGTT 
    GTTGATGAGA TTGATGAGGT GATGGAGCTC TTAAAGAAGA CCTGGGGTAT 
    TCTGGGAATT AACCAGATGC TTCACAACCT TTGCTTTGCT TGGGCATTGT 
    TCAACCATTT TGTTATGTCC GGGCAAGTAG ATATTGAGTT GCTCTCTGCT 
    GCGGAGAATC AGTTGGCCGA AGTTGCAAAG GATGCCAAAA CCACAAAAGA 
    TCCAAATTAC AGCAAAGTGT TGAGTTCAAC TTTAAGCTCA ATAATGGGTT 
    GGACAGAGAA AAGACTTCTG GCTTACCATG AGACCTTCAA TACAAGTAAC 
    ATTGAGTCCA TGCAAGGTAT TGTGTCAATT GGAGTGTCAG CTGCAAGGGT 
    TCTTGTTGAA GATATATCCC ATGAATACCG TCGGAGGAGG AAAGAAGAGA 
    CTGACGTAGC TCGCAGCAGG ATAGAGACCT ACATAAGGTC TTCACTCCGT 
    ACAGCTTTTG CTCAAAGAAT GGAAGAAGCA GATTCCAAGC GGTCATCAAG 
    AAACCCTACC CCTGTTCTGT CTATCCTTGC AAAGGACATT GGTGACCTAG 
    CAATTAAGGA GAAAAATTTG TACAGCCCAA TTTTAAAGAC ATGGCATCCC 
    CTTGCTTCAG GCGTTGCTGT TGCCACCCTT CATTCTTGCT TTGGAAATGA 
    GCTGAAACAG TTCATAGCTG GACTTACAGA GCTGACCCCA GATACGGTTC 
    AAGTGCTTAA GGCTGCTGAT AAATTAGAGA AGGATCTTGT TAATATTGCA 
    GTTGAAGATT CTGTGGATAG TGATGATGGA GGCAAGTCAT TAATCAGAGA 
    GATGCCACCA TATGAAGCTG AAAATGCAAT TGCTAACCTG GTGAAAGTTT 
    GGATTAAAGA AAGGATAGAC AGGCTCAAGG GATGGGTTGA TCGGACTTTG 
    AAACAAGAGA CTTGGAATCC AGCTGCCAAC AGAGAGAATA TTGCTCCCTC 
    TTGTGTGGAG ATGCTTCGGA TGGTTGGTGA AACATTAGAT GCATTTTTCC 
    AATTGCCCAT TCCAATGCAT CCAGTTCTTC TTCCTGACCT GATGTTTGGA 
    CTTGATAGAA GCCTACAGCT TTTTGTGTCT AAAGCAAAAT CTGGCTGTGG 
    AACAAGGAAT TCTTTTATGC CCCAACTACC TCCGTTGACA CGATGCGAGG 
    TAGGATCGAA TATATTGTTC AAGAAAAAGG AAAAGCCACA GAATCCACAG 
    TACCGAGGAT CACAAAATGG AACAACCAAT GGCGCTGATC CCTTAGCCCT 
    TCCTCAACTC TGTGTACGCT TGAATACGCT TCAATTCGTG CGAGGTGAAC 
    TCGAGAACTT AGAGAAGAAG AGAAAAACAG GCTTGCGGAA TGTCGAGTCA 
    GCTCAGGCAG ATGTTACCGA TGGATTGGAC ATCAAATTTG AGCTTTGTCA 
    GACAGCCTGT CAAGAGGGCA TTCAGCAGTT ATGTGAGACA ACTGCATATA 
    AGGTGACATT CTATGATTTG GGGCACGTTC TCTGGGATAT CCTTTATATT 
    GGTGACATTG CATCAAGTAG GATCGAGATA TTGTTGAGAG AACTCGACCC 
    TATACTAGAG ACCATATCTG GTATGGTGCA TAACAAAGTG CGGAACCGTG 
    CTATAACCGC ATTGATGAAA GCCACTTTTG ATGGGTTCTT GCTGGTGCTT 
    CTTGCTGGTG GGCCTTTGCG TGCTTTCACC CGTCAAGACT CCCAGATAAT 
    AGAGGATGAC TTCAAGGCCC TTAAAGACCT GTTTTTAGCA GATGGTGATG 
    GTTTGCCAGA GGAATTGGTC GATAAGGCAT CCTCCCAGGT CAAGAATGTC 
    CTACCCCTCC TACGAACAGA CTCCGAGAGC CTTATTGACC GATTCAAACG 
    CATGATGGCT GAGTCTAATC GATCTGGAGC CAAGAATAGG TTACCATTGC 
    CACCAACAAC AGGGCACTGG AGCCCGAACG AACCCAACAC AGTCCTGCGA 
    GTTCTGTGCT ACCGTTATGA TGAGACGGCT ACCAAGTTCC TAAAGAAAAC 
    CTATAATCTT CCCAAGAAGA TCTGATGAAC TCGATGTACA TTTTCTGGAA 
    ACAAAATCAT GAAACCCACT GAGGAAGTCA GGATTTGGAA TGATTTTGTC 
    ACATCCTCCT TTGAGGAACA CTACCATTGT AAAGCTACCA CTGCGGAGTT 
    TGCCTTATCT GAGGCGATTG ATTTGAACGG GGGAGTTCAA TTCAGCAACT 
    TGGCCCTTCT ATCACATGCT GTTCAGTGGC GCCAAGAAAT ATGCTGGTAC 
    TCTTTTCTTT TTCTTTTTTC CTTTTTTTTT TGGGGGGGGG GGATTACTTA 
    CAGGTCGATT TGTTTATTAT TATGATTATA TGTTTTACCC TAATCCAGTT 
    CTTTTGCTGA CCTTTGCCGC TGCATGTGTG TATTTTTCCA GTAGCTGTAG 
    TTTGCAACAG ATATACCCAT CTTGTGAATA AGTTTTGTAC TGGTGTGACT 
    TGCTGCGTTG GACTTGAGTA TATCATTATG CAAGGCATCT GGTTCCTGC

    Gene models with high sequence identity

    1. AT2G25800.1 [+] show detail - Protein of unknown function (DUF810)
      E-value: 0; Score: 999.99

     

    InterPro Scan Digest

    Program Description E-value
    ProfileScan Munc13 homology 1 26.427
    ProfileScan Mammalian uncoordinated homology 13, domain 2 22.152
    Coil coiled-coil 0
    HMMPfam Protein of unknown function DUF810 2.1e-270

    See the detailed result >

    AT2G25800.1

    Model type
    Protein coding
    Short Description
    Protein of unknown function (DUF810)
    Computational Description
    CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Mammalian uncoordinated homology 13, domain 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF810) (TAIR:AT2G20010.2); Has 317 Blast hits to 232 proteins in 40 species: Archae - 0; Bacteria - 8; Metazoa - 29; Fungi - 20; Plants - 175; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR