K16922

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K16922

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K16922

Determination of introduced cDNA(s)

  • J013134P07 - Rice Full-length cDNAs - Original: J013134P07

    full reading [+] show sequence

    Nucleotide sequence: J013134P07 - full reading 
    GAATTTGGGC CTTCTCCTCC CTCCTCCTCC TCCTCCTCCT CCTCCAACTC 
    CCTCGAGATT TCTCATGGCG GCGGCGGCGG CCTCCTCCTC CTCCTCGTCG 
    GCGGCGGCGA CGCCGCAGGG GGTGACGGAG CGGCGGGGCA TCCCGGCGGC 
    GTCCTTCGTC GAGGACGTCG AGACCTACCT CCGCCAGGCC GGGCTCGACG 
    TCAACTCCGG CCTCGCCTTC CTCCAGGAAA GGTATAGGTA GAGATAGCTC 
    CAGCTAAGCT AAGCCTCGCG ACGCGCGTTC CCCCTCCCTT CTCTTCTCCT 
    CCTCGGGGTG TCGAGGCGAC CGCCTGCCGC GCAGTGTGCT CGGTGAGGCG 
    GATCGGGGGG GGGGGGGGGG TCGCTTCCTC GCGTGGTGGT GGTGCGCGCG 
    CGCATGTGGA TCGGCGAGAT GGGGACGGCG TCTCCCGTGT GCGGCGCTTG 
    ATGGGAGGTT CGATCCACCG GCGGCGTCGT CTTGCGTTGG ATCTATCATC 
    TATGTTTGTG TCGCTGTGAT CTATCTCCGC GAGTTCCTCG GGAATTTAGG 
    ATTGCAGCTG ACCTGATGGG ATGGGAGGTC GCGCTAGCTA GTAGGTGAAA 
    CATTAGGATT TCACATTACG ATTTTATTAG GATTTCATTT TTAGGATTTT 
    AGGATTTCAG GGTTTTGGAT TTCACATTAC GATTTTATTA GGATTTTAGG 
    ATTTCAGGGT TTTGGAGTTA TTAGGATTTC ACATTAGGAT TTTAGGATTT 
    CAGGGTTTTG GAGTGGCGTT GAAGGGATCA TGAGTGGCTC CGTCGCGCAG 
    CGCTTGTCAG TGCTACCTAC CTGTTTGCAG AGTTGCTTAG GTAATGGCCT 
    TGGAGTGTGC ATACCTGTTG TTTTGGTTGT TTAGCGACTC GGCTTGGCCG 
    CTCCAGAGGT CTGGAAGCTG CTGTGCTGTA TGACTGATTG ATTTCATTGA 
    TTTCTTTGAT TACTCATGGT TTGTTGATCA TGCCCTTTGG TACGCTAGTT 
    GTTGGTGCCT GCGTTTTTCT GTTGATTATG GATGATAGCC GGATTTCCTG 
    TTAAAGACAT GTTGTTCGGT AAAATTGCTG GTTCTGCGGT TACAGCTTGT 
    GCATCATGCT TGATCTGGGA AAGGCTATTC CTTTCTTGGG ATCTTGAACC 
    CTCAACACAA GCATGTCAAT CAATGTGATT GTCCCCCATG ATTCGGATGC 
    GAACAACTCT CACGTTGACC AGTAATCCCA TTTAGTCTCG TTTCAAGAAT 
    TATGGGGTTA CTAATATTTC AAATAATGCT AATTCCAGGT AGTTGTGCTA 
    GTGCAGTTGG CAGGGGCAGC CGTCGTCCGC CCCGCCAGCT TGCGTTTGAC 
    TCCCAAGCGT GCTCACATCC GTTGTTAATT AATCGATACC AAGCTCCTTC 
    TTAGTTATCC TATGTTTTCT ACCTTCAAAT AAGGAATGCA ACGTGTCATT 
    GTAGATGTAG AATTTTAGGG GATGTAGACC TAGACATCTG TTGGTCTAGG 
    TCAGTTATTC TAATGATAAA GGTTTTTAAG GTGCACCACC TTGTATGGAG 
    ACCATTTGTT CGTTTTGATG TAACGGCTAT CATGAATCTT AACTGTACCT 
    TCAAGGATCT AAGAGACCAT CTATAACCTT TTAAAGGATA ATGATATCTT 
    TAAACATTGT CAAATTTCAT TACTGATAGA TAAAAAGAAA ATAAGATAGT 
    ATTTGAAAGG AAAGGGATTA AAATACAATT AATTCCATCC TTTATTGTCA 
    AACGATTTGC CATTTTCCTT GCTAAAAGAA AAACTTCCTT CAGTAATTTT 
    TGTTGGCACT GAGAAATGCA AATCTTGTTC TGGAATACAA ACATTTAATA 
    ATCAGTAGTA CACTAGGTTA CACAAAAGAA TTGACTTCTG AGACTTTCAT 
    CTTGTGAAAT TGATAGTTAA TTTAGCTTTT TATTTTTTGG GGTGTTTTCT 
    ATTCATCAAC GACTTGAGAA TTGCTAGATC CCAATCAACT TTCTTTTTTC 
    ATTCTTCTTA TTTACTTGCA CTTGAAACAG AAAATTACAT TAGAAACAAC 
    ATTACATTTC CCGC

    Gene models with high sequence identity

    1. AT5G49510.2 [+] show detail - prefoldin 3
      E-value: 3e-08; Score: 57.80

     

    InterPro Scan Digest

    See the detailed result >

    AT5G49510.2

    Model type
    Protein coding
    Short Description
    prefoldin 3
    Computational Description
    prefoldin 3 (PFD3); FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding; LOCATED IN: prefoldin complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin alpha-like (InterPro:IPR004127), Prefoldin (InterPro:IPR009053), Prefoldin, subunit 3 (InterPro:IPR016655); Has 406 Blast hits to 406 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 158; Fungi - 133; Plants - 37; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR