K17115

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	increased size (PATO:0000586) (Seed::Shape::large) increased length (PATO:0000573) (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K17115

Determination of introduced cDNA(s)

J033061M15 - Rice Full-length cDNAs - Original: J033061M15

full reading [+] show sequence

GAGTCACACG CACAGATCCA CACGATTCCA AACTCCCAAC TCTCGACTAG 
AACCGACTCC AATGGCGGCG GCGGCGGCTG CTGCTCCGCC CTTCGCCGCC 
GGCGACTCGC CGCCCCCGAC CGCCTTGCTC CTCCCCCGCA CCACCACCAC 
CACCGCCGGC GCCGCCCCCG CGCCCCGGCG TTCCTCCGCC TCCTCCCGCC 
TCCACCTCCT CCTCACCGCC GCGCTCGCCG TCGCGACCTC CTACCTCCTC 
CTCATCCTCC CCCGCACGCC CCTCTCCGCC GCGCCGGCGC CTGCGGCCGC 
CGCGCGGGCG CAGGTGAAGC TCGAGAAGCC GGTGGTGATC CTCATCTCCT 
CCGACGGGTT CCGCTTCGGG TACCAGCACA AGGCCGCGAC CCCGCACATC 
CACCGCCTCA TCGGCAATGG CACCTCCGCC GCCACGGGCC TCGTCCCCAT 
CTTCCCCACG CTCACGTTCC CCAATCACTA CTCCATCGCC ACCGGCCTCT 
ACCCTTCCTC CCACGGCATC ATCAACAACT ACTTCCCCGA CCCAATCTCC 
GGCGACTACT TCACCATGTC CTCGCATGAA CCCAAGTGGT GGCTCGGGGA 
GCCCCTGTGG GTCACCGCCG CCGACCAGGG TATGCAGGCC GCCACCTACT 
TCTGGCCCGG CTCGGAGGTG AAGAAAGGCA GCTGGGATTG TCCCGACAAG 
TATTGCCGCC ACTACAATGG CTCGGTACCA TTCGAGGAGA GGGTCGATGC 
GATCCTTGGT TACTTTGATC TCCCATCTGA TGAAATGCCG CAGTTCCTGA 
CGCTTTATTT TGAAGATCCA GATCACCAGG GGCATCAGGT GGGTCCTGAT 
GACCCGGCCA TCACGGAGGC GGTGGTGCGG ATCGATGAGA TGATTGGGAG 
GCTCATTGCT GGTCTGGAAG AAAGAGGAGT GTTTGAGGAT GTCAATGTTA 
TATTGGTTGG TGACCATGGG ATGGTTGGGA CTTGCGACAA GAAGCTGGTG 
TTTCTCGACG AATTGGCTCC ATGGATTAAG TTGGAGGAAG ATTGGGTTTT 
ATCAATGACC CCGTTGCTGG CCATCAGGCC GCCAGATGAC ATGTCGCTGC 
CAGATGTTGT GGCCAAGATG AATGAAGGGC TTGGGTCTGG GAAGGTGGAG 
AATGGTGAAT ATCTAAGAAT GTACTTAAAG GAGGATTTGC CTTCTCGACT 
TCACTACGCA GATAGTTATA GAATCCCACC GATAATTGGG TTGCCAGAGG 
AAGGGTATAA AGTGGAGATG AAGCGATCGG ACAAAAATGA ATGTGGAGGA 
GCACATGGTT ATGACAATGC CTTCTTCTCA ATGAGAACCA TATTTATCGC 
GCATGGTCCT CGTTTTGAAG GTGGTAGAGT CGTGCCATCC TTTGAGAACG 
TGGAGATATA CAACGTTATT GCTTCCATTC TCAATTTGGA GCCAGCTCCA 
AACAATGGTT CATCTTCTTT TCCTGACACA ATTCTTTTGC CGAGTGAATG 
ATCACATATA CATGTGACTG CTGTGGTTTT GGATGAGAAA GGTCTTGCTG 
TTGGTATCCT CCTTTAGTCG TAATTGCACT TGTACACTTA TCATATTAGA 
TTCGTGTCAC TAGTGGCTAT TCACTGCCTG AATGCAAATG CTGCTAGTAG 
AGAGTATCTT TGTCCTTATG GACAACATTT GCTGTTGTTA TCATGTCTTA 
TCCTTAGCGG TTTTCTTATG CTTAAATTTT CATGCAAGTT CAATTAAGCT 
CGCATTCTCT GCTT

Gene models with high sequence identity

AT4G29680.1 [+] show detail - Alkaline-phosphatase-like family protein
E-value: 1e-180; Score: 629.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase	5.7e-88
superfamily	Alkaline-phosphatase-like, core domain	1.9e-97
HMMPanther	ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTER	2.6e-241
HMMPanther	ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTER	2.6e-241
Gene3D	Alkaline phosphatase-like, alpha/beta/alpha	1.1e-66

See the detailed result >

AT4G29680.1

Model type: Protein coding
Short Description: Alkaline-phosphatase-like family protein
Computational Description: Alkaline-phosphatase-like family protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process, nucleotide metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase (InterPro:IPR002591), Alkaline-phosphatase-like, core domain (InterPro:IPR017850); BEST Arabidopsis thaliana protein match is: Alkaline-phosphatase-like family protein (TAIR:AT4G29690.1); Has 2446 Blast hits to 2426 proteins in 629 species: Archae - 13; Bacteria - 1090; Metazoa - 671; Fungi - 207; Plants - 107; Viruses - 6; Other Eukaryotes - 352 (source: NCBI BLink).
Link: InterPro Scan - TAIR