K17514

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K17514

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K17514

Determination of introduced cDNA(s)

  • J023110J22 - Rice Full-length cDNAs - Original: J023110J22

    full reading [+] show sequence

    Nucleotide sequence: J023110J22 - full reading 
    GACAACTCAC ACACAGCTCG TATTTTCCTA GCCCAGTAGC CCACTAGCCG 
    GCATGGAGAA GAAGCGGGTG GTCATCGTCG GCGCCGGCGT GAGCGGCCTG 
    GCGGCGTGCA AGCAACTGCT GGAGCGCGGC TGCCGGCCGG TGGTGTTCGA 
    GGCGGACACC GGCCTCGGCG GCGTGTGGGC GCGGACGCCG GAGTGCACCG 
    CGCTGCAGAC GCCGCGGCCC ATGTACCAGT ACTCCGACTT CCCGTGGCCG 
    GAGACGGTGA CGGAGGTGTT CCCGGACCAC CGCCAGGTGA TGGACTACCT 
    CGGCGCCTAC GCTCGCCGCT TCGGCGTGCT CGACTGCATC AGGTTCGGCC 
    ACCGGGTGGC GGGGATGGAG TACGTCGGCG TCGGCGAGGA GGCTGTGGCG 
    GCGTGGGATG AGTGGGCTGG GAACGGCGAC GCTTTCGGCT CCGGCTCCGG 
    CGAGTGGCGG CTAGAGGTGG TCGACGGTGA GGGCCATATT GAGACACACA 
    AGGCGGATTT TGTCATACTT TGTATTGGGA GGTTCAGTGG AGTGCCCAAC 
    ATACCAACAT TTCCTCCAGG CAAAGGTCCA GAAGCATTTG ATGGCCAGGT 
    GATCCACTCC ATGGATTACT CCAAGATGGG CACCAAGAAT TCTAAGGAAA 
    TGATCAAGGG CAAGCGTGTC ACGATCGTTG GCTACCTCAA ATCAGCACTT 
    GACATTGCTG CAGAATGTGC AGAAGTAAAT GGTACTGAGA TTCCATGTAC 
    AATGGTGGTC CGAACAAAGC ATTGGATCAT ACCAGACTAT TTTGCATGGG 
    GCGTCCACAT CTCAAAGCTG TATCTTAATC GGTTTTCTGA GCTTCTTATT 
    CACAAGCCTG GTGAAGGCTT ACTCCTTAGC ATCTTGGCCA CCCTCTTGAC 
    TCCATTGAGA TGGATATTTT CGAAGTTTGC AGAAAGCTAT TATTCCATTC 
    CAATGAAGAA GTATGACATG GTGCCTGACC ATAGCCTATT TGAGGCTTTG 
    ATTACATGCT TGGTTGCCAT TACACCCAAA GACCATTACA AGAGATTAGA 
    AGAAGGCAGC ATTGTTCTGA AGAAATCAAA GACATTTTAG CTTTTGCAAG 
    GAAGGTGTGC TTGTCGAAGG CCAATCTTCG CCGATAAAGA GCGATATAGT 
    GATCTTTGGA ACTGGGTTCA GAGGGGATCA GAAGATCAAG GAGATGTTCA 
    CTTCTGAATA CTTTCAGAGC ATTGCAGTAG GCTCTGCATC TACAACTGTA 
    CCTCTCTACA GGGAGATCAT TCACCCAAAG ATCCCGCAGC TCGCGGTTAT 
    CGGCTATTCA GAGAGCTTGG CAAATCTCTA CACATCAGAA TTACGGGCCA 
    AGTGGCTGGC ACATTTCATG GATGGTGGCT TCAGGTTGCC AAGCATCAGT 
    GTGATGCAGA ATGATGTCCT GGAATGGGAG AAGTTCATGA AGCGCTATTC 
    TCGTGGTTAC TTTCGCAGAT CCTGCATCGG AATCCTTCAC ATCTGGTACA 
    ATGATCAGCT ATGCCGGGAC ATGGGGTGCA ATCCGAGGAG GAAGAACGGA 
    TTCTGGGCTG ATTTATTCGA CGTTTATGGC CCTAGTGATT ATATTGATCT 
    TTTCCCCAAG AAAGAGTAGT ACTTTCGACT CGGAGTCGTG TGGAATAAAT 
    TTATCGCCTG ATCATGCTTG TTTTAAGGTT GTCACTACCT GGTTTCTTGG 
    ATTTCTGCTG TTTTGCATAG TGCAAATTCA GTAAACCGTG TGAAGTGTAA 
    GGTACAGTTG TGTAATATAA GGAGATGGAT TTTAACC

    Gene models with high sequence identity

    1. AT1G19250.1 [+] show detail - flavin-dependent monooxygenase 1
      E-value: 9e-97; Score: 120.00

     

    InterPro Scan Digest

    Program Description E-value
    ProfileScan PROKAR_LIPOPROTEIN 5
    HMMPfam Flavin-containing monooxygenase-like 2.7e-27
    HMMPfam Flavin-containing monooxygenase-like 4.8e-09
    Gene3D no description 3.8e-37
    Gene3D no description 5.7e-16
    HMMPanther DIMETHYLANILINE MONOOXYGENASE (FLAVIN-CONTAIN 2.6e-55
    HMMPanther DIMETHYLANILINE MONOOXYGENASE 2.6e-55
    HMMPanther DIMETHYLANILINE MONOOXYGENASE (FLAVIN-CONTAIN 5.7e-17
    HMMPanther DIMETHYLANILINE MONOOXYGENASE 5.7e-17
    superfamily FAD/NAD(P)-binding domain 9.2e-43

    See the detailed result >

    AT1G19250.1

    Model type
    Protein coding
    Short Description
    flavin-dependent monooxygenase 1
    Curator Summary
    FMO1 is required for full expression of TIR-NB-LRR
    Computational Description
    flavin-dependent monooxygenase 1 (FMO1); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: stem, leaf whorl, sepal, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Dimethylaniline monooxygenase, N-oxide-forming (InterPro:IPR012143), Flavin-containing amine oxidase (InterPro:IPR001613), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT5G45180.1); Has 7639 Blast hits to 7432 proteins in 837 species: Archae - 6; Bacteria - 3396; Metazoa - 753; Fungi - 1311; Plants - 833; Viruses - 0; Other Eukaryotes - 1340 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR