K18115

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K18115

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K18115

Determination of introduced cDNA(s)

  • J013110H01 - Rice Full-length cDNAs - Original: J013110H01

    full reading [+] show sequence

    Nucleotide sequence: J013110H01 - full reading 
    GATCCAAAAA AACCAAAACG AAACGGAAAC GCGCTCCCCT CCTCCTCCTT 
    CCCGTCGTCG CCTTCTTCCC CTCTCCGCCT CTCCGCCTCC GCCTCCTCCG 
    CCTCGGCGCA AACCCTAACC CTAACCCTAA CCCTACCAAT CCTCCTCCTC 
    CGATGGGAGC CGTCACCTCG ACGGTCGCGG CCCGCTTCGC CTTCTTCCCG 
    CCGAGCCCGC CGTCGTACGG CGCCGAGGCC CCGCCTCCCC CCGCCGCGGC 
    GGGCGCGGGG GTGGGGGTGG AGAAGGATGG AGGGGGAGGA GGGGTGGTGG 
    TGGAGCTGAC GGATGTGCCG AGGAGGGGGA ACGTGGAGGC GAGGCGGCTG 
    CGGACGAAGC GGGGGACGGA GGTGGTGGCG ATGTACGTGC GGCAGGCCGG 
    GGCGCGGCTC ACGCTGCTCT ACTCGCACGG CAACGCGGCC GACCTGGGCC 
    AGATGTTCGA GCTCTTCGTC GAGCTCAGCG CCCACCTCAA CGTCAACCTC 
    ATGGGCTATG ACTATTCTGG TTATGGGCAA TCTTCTGGGA AGCCCAGTGA 
    GCACAACACT TACGCTGATA TAGAAGCCGT TTACAGATGT CTTGTAGAAA 
    CCTATGGAGC CTCCGAGGAG AATATCATTC TTTATGGACA ATCAGTGGGT 
    AGTGGTCCTA CTTTGGATTT AGCCTCCCGT TTGCCTCATT TGAGGGCAGT 
    TGTTCTGCAT AGCCCAATTT TATCTGGCTT AAGAGTGATG TATCCTGTAA 
    AACATACATA CTGGTTTGAC ATATACAAGA ATATTGACAA AATTCCATTA 
    GTCAGATGCC CTGTGTTAGT GATTCATGGT ACAGCTGATG AAGTTGTCGA 
    CTGTTCCCAT GGGAGGGCAT TGTGGGAGCT TTCCAAAGTA AAGTATGAGC 
    CTCTATGGGT CAAAGGAGGA AACCACTGTA ATTTGGAACT GTACCCAGAG 
    TACATTAAGC ATCTAAAGAA GTTTGTTGGG GCCATTGAAA AATCGCCACC 
    CCTATATGAT GAATCTCCAG AGAGCTCAGG TCCATCAGAT AATACTCAAA 
    CAAACCCTGA AGGCACAGAG GAATCTAGGA AAAGCACAGA CTGCAGGGAG 
    AAAACAAGGC CAAGCATAGA TCACAGACAA AGCACAGATC GCCGGGACAA 
    ATCAAGGGGC AGCACAGATA GGAGGGATAA AAACAGAAAG AGTGTGGACC 
    AACCACGGGC TAGTGTCGAT CAGCCTGATC GGCCAAGGAA AAGCGTTGAC 
    CGCTTTGGTG GGGTGATGAA GTCCGTCAGA TATATCGACT GTTTCAGAGT 
    AACAACTGCA TCTGGGAGCT GAAGAAAAAT ATATATACCA AAAAGGTTAG 
    CGTTGGGGTT CTCTGTATGT AGTCCATTTG TATAACTTAA TTCATTCGGG 
    TGATTGGTTT GGTCGTTGGA GGCGTGTCTC ACTACAATGG GGGGGACTTG 
    TATTGTTTTT CTTGATTTTT TTCCAATATG AAATAATTAT TTGTCC

    Gene models with high sequence identity

    1. AT3G01690.1 [+] show detail - alpha/beta-Hydrolases superfamily protein
      E-value: 3e-109; Score: 392.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther UNCHARACTERIZED 1.2e-158
    HMMPanther UNCHARACTERIZED 1.2e-158
    Gene3D no description 1.9e-18
    superfamily alpha/beta-Hydrolases 4.9e-38
    HMMPfam Alpha/beta hydrolase fold-1 4.6e-06

    See the detailed result >

    AT3G01690.1

    Model type
    Protein coding
    Short Description
    alpha/beta-Hydrolases superfamily protein
    Computational Description
    alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G14390.1); Has 3903 Blast hits to 3890 proteins in 823 species: Archae - 8; Bacteria - 1296; Metazoa - 705; Fungi - 204; Plants - 316; Viruses - 6; Other Eukaryotes - 1368 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR