K18248

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	increased width (PATO:0000600) (Seed::Shape::wide)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K18248

Determination of introduced cDNA(s)

J013001G24 - Rice Full-length cDNAs - Original: J013001G24

full reading [+] show sequence

GAGGAGGAGA TAAGGCCGCG CGCTCTCCAC CACCACGGCC GCGAATGCAA 
TTACCCGCCA TGAGTTGCTC GCCGTCGCAG TCCTCCGCCG CCGCTGCCGC 
GGCGGCGTAC GGATGCTGCC AGCGCATCCT CCTCGCGTCG ACCTCCTTGC 
CGGCGACGGG GAGGCCCGCC CGCCTCGGTC TCAAGCTTCG CTCCACCCAC 
TCGCTTCAGA TCAGGAACCG AAGGTTTGTC TGCCAGGCAA TGACTGAGAC 
TGAGCCCGAC GGCGACGGCA ATGGCGACGA GGAGAAAGAA GAGCTTGGAG 
ATGATGCTTC ATCACCTTCG GTTGATAGTG TTACACAAGA AAATGGATCT 
GCAGAAAGTG AGACTAATGC AGATAATACG AAAGACGAAA CTGTAAATAC 
AGAACCACTC AGCTCCAGTG ACACAGTTCA GAACATTGAT GGAGATGCTA 
CTCCAGCCAG TGATGCACAG GAAAATGTGG AAGTAGTTGA TGTTGCTGTC 
GGTTCACCTT TGCCAGGAAT GAAGCAACAA CTTGATGAAT CTGTCAGGAT 
CCCCAAGGCT ACAATAGACA TTCTCAAGGA TCAAGTTTTT GGTTTTGACA 
CGTTTTTCGT GACCAGCCAG GAGCCTTATG AGGGTGGAAT ACTGTTTAAG 
GGAAATTTGC GTGGTCAGCC AGCAAAAAGT TATGAGAAGA TCACAAATCG 
GCTGCAGAAC AAATTTGGTG ATCAATATAA GCTTTTTCTT CTCATTAACC 
CAGAGGATGA TAAGCCAGTT GCAGTAGTTG TACCTAGGCA AACATTGCAG 
CCTGAAGCTA CAGCTGTCCC AGAGTGGTTT GCTGCTGCTT CATTTGGAGT 
AGTTACCATC TTCACCCTTT TGCTCCGAAA TGTACCTTTG CTACAGGACA 
ACTTGCTATC AACATTTGAT AACCTTGAGC TATTAAAAGA TGGAGTTTAT 
GGCGCCCTAG TAACTGCGGC CATAATAGGC GTTCATGAGA TTGCACATAT 
CCTTGCTGCT AGGGATACTG GAATCAAGCT TGCCGTACCA TATTTTGTTC 
CTAGCTGGCA GATAGGATCT TTTGGTGCTA TTACCAGAAT TGTCAATATA 
GTCCGCAATC GTGAGGACCT ACTGAAGGTA GCAGCTGCTG GACCATTGGC 
AGGGTTCTCC CTTGGATTTG TTCTTTTGCT GCTAGGCTTC ATCTTACCTC 
CAAGTGATGG CCTTGGCCTT GTGATAGATC CAGCAGTATT TCATGAATCA 
TTTCTTGTTG GTGGTCTTGC AAAGCTTATT CTTGGAGATG CTCTAAAAGA 
AGGAACAAAA CTATCCATAA ATCCACTGGT CTTATGGGCC TGGGCTGGTC 
TCCTGATCAA TGCCATCAAT AGCATCCCTG CAGGAGAGCT TGATGGCGGC 
CGCATAGCAT TTGCCATGTG GGGAAGAAAG ATATCGTCTC GAATCAGCAG 
CTTGGCCATT GGACTTCTTG GAATTTCAGC TCTCTTCAAC GACGTCGCGT 
TCTACTGGGT GGTGCTGATC TTCTTCTTGC AGAGAGGACC GATTTCCCCT 
CTCTCTGAAG AAATAACAGA ACCTGAGAAC AATTACATCA GCATTGGTGT 
AGCCATCTTG CTCTTTGGAC TTCTTGTCTG CCTACCCTAC CCATTCCCCT 
TTGATCCATC ACAACTAACT GATTTTGACT TGTGAAACAA AATCAGTCAC 
AGGTCACAAG CTTTCTTCCT CCCAAATTTA TGTTAGATGC TGAGATGTAT 
GTAACCTGTC GGCTCCCTGT TTTATTTATC TTAGCCTTGG TCATAAAGAT 
TTGGAGTCTA TGAGCTCCAT TGCTCCTTGC AGTAGCAAAA TAAAATGCAG 
GAGCATTCCT GTGGTAGTTC AGTTGTTGTA GTAGTATTTT GGTAGGATGC 
ATCAGTGTAG AACAGCATAT GAGCAGTTGA GCACATGATT CTGGATGTAA 
TTTTATCAGT GCAGTAGTTT TTTGCATTAA GGATGTATAA TTGCCTAATT 
GGAGTATCTG TTGGTAGGAA GAGTAACACC TTATTACAGA GCGCAAGATT 
CAGC

Gene models with high sequence identity

AT5G05740.3 [+] show detail - ethylene-dependent gravitropism-deficient and yellow-green-like 2
E-value: 2e-167; Score: 586.00

InterPro Scan Digest

See the detailed result >

AT5G05740.3

Model type: Protein coding
Short Description: ethylene-dependent gravitropism-deficient and yellow-green-like 2
Curator Summary: S2P-like putative metalloprotease, also contain transmembrane helices near their C-termini and many of them, five of seven, contain a conserved zinc-binding motif HEXXH. Homolog of EGY1. Each of the EGY1 and EGY-like proteins share two additional highly conserved motifs, the previously reported NPDG motif (aa 442
Computational Description: ethylene-dependent gravitropism-deficient and yellow-green-like 2 (EGY2); FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M50 (InterPro:IPR008915); BEST Arabidopsis thaliana protein match is: Peptidase M50 family protein (TAIR:AT5G35220.1).
Link: InterPro Scan - TAIR