K18647

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K18647

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K18647

Determination of introduced cDNA(s)

  • J013128E07 - Rice Full-length cDNAs - Original: J013128E07

    full reading [+] show sequence

    Nucleotide sequence: J013128E07 - full reading 
    GGCCGTCGCC TCGGCATAGA CTCCCCTCCC CGTCTCTTCT TCGCGAGCTC 
    GCCCCGCCTT CTGCGCCGAG CACCGCCTAT CTTCGCCGGC GTCCTCCCGC 
    TGCATCAGAG GTCTATCTGG TGGTCGCTTG AATCGGGAGG TTTTTGTTGG 
    ATTGGATTGG ATTCGGAGAG ATGGAGGATG TGGAGAACAA GCTAAAGGAC 
    TATGAGATTG TGAGGGAAGG CGAGGCGGAG ATCATCATCA ACAAGAAAAT 
    AGCAGCAAAT GAAGTGTTCT ACAATCCCGT GCAGGTCCAC AATAGAGATA 
    TGTCAGTTGC TCTTTTAAGG ACTTTCATTG CCAAGCGTGA GGAAGAACAT 
    AAGGCAATGA TGGATAAGAG GGACAAGGCG CATAACAAAG TGAGCCAGAG 
    TAAATCATCT GGTCCAAATG GAGAGAATGG GTCAACAGGA CAGCATGATG 
    AAATGGATGT TGATGCTGAA AAGGAAACAA ATAAAGTTGC GGATGAAACA 
    GAAGATCTGT CAACAGAAGC AACAAAGACA CCTTCGCGGG AAGTAGCCAG 
    AGAGCTTAAG GCACCAGTTG TTCTTGAGGC TTTGGCTGCT TCTGGGTTGA 
    GATCTATCCG TTATGCTCGT GAAATAGACG TGTTAGAAAA GGTGGTCGCT 
    CTGGACATTG ATAAAGCTTG TATTGAAGCT TGCAAGCGGA ATATAAAGTT 
    TAATGGTGCT TCTGCTATGA GTAAGATCGA GCCTCATTTG ACTGATGCTC 
    GAGTTTATAT GCTCACACAT CCAAAAGAGT TTGATGTGGT TGATATTGAC 
    CCCTATGGAG CACCTTCTAT TTTCCTTGAT TCGGCTGTAC AGGCTGTTGC 
    TGATGGTGGG CTATTAATGT GCACTGCCAC TGATATGGCG GTTCTATGTG 
    GGCCAAATGG TGAAGTTTGC CACTCCAAGT ATGGTTCCTA TCCAACCAAA 
    GGGAAGTATA ACCATGAAAT GGCTTTGCGA ATCCTCCTTG CCAGTATTGA 
    GAGTCATGCA AATCGATACA AACGATATAT TGTGCCTGTT CTCTCTGTGT 
    CTTGGATTTC TACATCCGTG TTTTTGTCCG AGTACTTACT TCTGCAAACG 
    AAGTAAAGAA GACTCCTCAA AAGCTTTCTT ATGTATATCA ATGTGTTGGT 
    TGCGATTCAT TTCATCTTCA GTGTCTTGGT AGGACCATAA CTAAGAACAA 
    CAGTGTGAAG AATGCGCCTG CCATTGGGCC TGTTGTTCCT CAAGAGTGCA 
    GTGCCTGTGG GAAGAAATTT ACTATAGGAG GGCCAATATG GTCTGCTCCT 
    ATACATGACC AAGAGTGGGT AGTGTCTACT TTGACAGAAG TTAAGTCAAT 
    GAAGGATAGA TATCCTGCAT ATGATAAGAT AACTTCAGTT CTGACTACCA 
    TATCAGAGGA GTTACATGAC ATCCCATTGT TCTTCAGTCT CCACAACATA 
    TGTGCTAATG TTAAATGCAC ATCTCCATCT GCAGTATTGT TCCGATCTGC 
    AGTCCTAAAT GCGGGTTATC GGATTTCTAG CACACATGTG AATCCACTTG 
    GACTAAAAAC TGATGCCCCT TGGGATGTTA TTTGGGACAT CATGCGCTGC 
    TGGGTGAAGA ATCATCCTGT AAAGGAACAA CCACATGACT CTGTAGGGAC 
    AGCGATCCTT TCAAAATCAC CCAAGCTTGA AGCAAATTTC TCTAGAGCGG 
    CTGCTGCCCT CAGCAGGGCT CAAGCAAAGA AGGTCAAGCG GTTCCTTCCG 
    AACCCAGAAC GTCATTGGGG TCCCAAAATC AGAGCTGGTC GGAAGATTAC 
    AAGTAAACAT GCTTCTCTGT TAGGTCCAGA CGTTGTCAAC CGTGTTATCA 
    ACGGTGCTGC CAGCACCGAA GATGAAAAGG TGGCCGAGCC AAATAATCCA 
    ACGACAGAAA CCGGAGGAGA TGCAACGAAT GAAGAGGATG AACCTTCAAC 
    AAAGCGCCAA AAAAACGGCG ATGTTGGATT GGCAACCGAA CCTTAATTGT 
    CACTGAACCT GAGCACGTTT CGCTTTCACC ACTCAATTCT TCCATGTTTG 
    TAATGCTTCA CTTTTCTTGA GGGTGTGACT GATGGGTATA TCTATCAGCT 
    GTGTTGCTAA ACGGTTTTTA GCAATGAATT TTGATCGCG

    Gene models with high sequence identity

    1. AT5G15810.1 [+] show detail - N2,N2-dimethylguanosine tRNA methyltransferase
      E-value: 0; Score: 340.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther N2,N2-dimethylguanosine tRNA methyltransferase 3.2e-46
    HMMPanther N2,N2-dimethylguanosine tRNA methyltransferase 1.7e-59
    HMMPfam N2,N2-dimethylguanosine tRNA methyltransferase 4e-44
    HMMPfam N2,N2-dimethylguanosine tRNA methyltransferase 7.9e-69
    superfamily S-adenosyl-L-methionine-dependent methyltrans 1.4e-11

    See the detailed result >

    AT5G15810.1

    Model type
    Protein coding
    Short Description
    N2,N2-dimethylguanosine tRNA methyltransferase
    Computational Description
    N2,N2-dimethylguanosine tRNA methyltransferase; FUNCTIONS IN: RNA binding, tRNA (guanine-N2-)-methyltransferase activity; INVOLVED IN: tRNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: N2,N2-dimethylguanosine tRNA methyltransferase (InterPro:IPR002905); BEST Arabidopsis thaliana protein match is: N2,N2-dimethylguanosine tRNA methyltransferase (TAIR:AT3G02320.1); Has 1017 Blast hits to 963 proteins in 359 species: Archae - 255; Bacteria - 70; Metazoa - 198; Fungi - 150; Plants - 103; Viruses - 0; Other Eukaryotes - 241 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR