K19032

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K19032

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K19032

Determination of introduced cDNA(s)

  • J023084K04 - Rice Full-length cDNAs - Original: J023084K04

    full reading [+] show sequence

    Nucleotide sequence: J023084K04 - full reading 
    GTGTAGGGTG CAGCCTGATG TCACCGCTCC CGGCGTGAAC ATCCTGGCGG 
    CGTGGCCACC CATGTCGTCG CCGACGGTGA TCCCGCTGGA CAAGCGCTCC 
    GTGACGTGGA ACTTCGACTC GGGCACGTCC ATGTCGTGCC CGCACGTCTC 
    CGGCATCGTC GCCGTCGTCA GGGCCGTGCA CCCGACGTGG TCGCCGGCAG 
    CCATCAAGTC GGCGCTGATG ACCACGGCAT ACATGTACGA CGACACGTCC 
    GACGTGATGC TGGCCGGCGG GACGCTGAAG GCGGCGGACG CGTTCGACGT 
    CGGCGCCGGC CACGTCGACC CGCTGCGCGC GCTGGACCCG GGCCTCGTCT 
    ACGACGCCGG CGTGCGCGAC CACGTCCTCT TCCTCTGCGG CCTCGGCTAC 
    ACCAGGTACC AGATACGCCA GATGGTGCTC CCCTCGCCGT CGCTCGACAC 
    GAGCTGCGGC GGCGAGGGCG GCGGCGCGGC GCCGCCGGAG TACGACCTCA 
    ACTACCCGGC CATCGTGCTC CCGCGGCTCA ACGCGACGGT GACCGTGAAG 
    CGGACGGTGA CGAACATGGG GCCCCGGAGG GACGCCGTGT ACCGCGCCGC 
    CGTCGTCAGC CCGCACGGCG CGCGCGCCGC CGTGTGGCCG CCGGCGCTGT 
    CCTTCTCCCC GTACCGCGAC ACGGCCTCCT ACTACGTGAC CGTCGCGCCG 
    GCGAAGCTGT CGCGCGGCCG GTACGACTTC GGCGAGATCG TCTGGTCCGA 
    CGGCTACCAC CGCGTCCGCA CGCCGCTCGT CGTCAGGGTC ACCACCATGC 
    CCGACACCGA CACCGGCGTC GACGTCGACG TCGCCGCCGC GCGCGCCATG 
    GACACGGCTA CTGCCACCCA GCTGCAGGAT TCCTAGCTCA GCTTGTTCAG 
    AAACCTGGTT TCATCTGGTC ATCAAATCAT CAGACTACAA AAATTGAGAT 
    CTTTTTGGGT GTGGATTTCT CGAGCTTGGA GTTAAAATTT CTTCGGACAA 
    GTAGCCACTA GGTGTCAGTG TGTCACTGGT CAAGTACTAC TAAATGAGCA 
    AATTTCTGGA TGCTACTATT ACTGTCATTT CTATGGCGGC TAATGATGCA 
    AGAATTATTT ATATGTATGA TGATGTGAGT AATTAAAAAT TTGATGATTC 
    ACC

    Gene models with high sequence identity

    1. AT4G26330.1 [+] show detail - Subtilisin-like serine endopeptidase family protein
      E-value: 3e-76; Score: 282.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther SUBTILISIN-LIKE PROTEASE (PLANT) 3.2e-96
    HMMPanther Peptidase S8, subtilisin-related 3.2e-96
    HMMPfam Peptidase S8/S53, subtilisin/kexin/sedolisin 3e-09
    PatternScan Peptidase S8/S53, subtilisin, active site 0
    superfamily Peptidase S8/S53, subtilisin/kexin/sedolisin 2.4e-28
    Gene3D Peptidase S8/S53, subtilisin/kexin/sedolisin 3.7e-22

    See the detailed result >

    AT4G26330.1

    Model type
    Protein coding
    Short Description
    Subtilisin-like serine endopeptidase family protein
    Computational Description
    UNFERTILIZED EMBRYO SAC 17 (UNE17); FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, double fertilization forming a zygote and endosperm; LOCATED IN: peroxisome, cytoplasm; EXPRESSED IN: male gametophyte, leaf, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT4G10520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR