K19517

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K19517

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K19517

Determination of introduced cDNA(s)

  • J023035P08 - Rice Full-length cDNAs - Original: J023035P08

    full reading [+] show sequence

    Nucleotide sequence: J023035P08 - full reading 
    GATTCACACA AGCATCTCCT CTTCTCCTCT TCTTCCATCT GCAAGCTCGA 
    GCTCGTTCTA GAAGGTTCTA GACACATCAG TTGCCATGGG CAACGGCCTC 
    TCCCCGTGCA TGCACCTGCC GGCGACGGCG GCGGCGGGGG TGAAGCTGGT 
    GTACTGGGGC GGGCAGACGA GGATGCTGGA CGACGATGGC GGGGTGTGCG 
    CCGTGGCGGG GGACGTCACG GCGGAGCTCC CCGGTGACCA CGTCGTCTGC 
    GCGGCCGACT CCTTCTACGT CGGCCTCCCG ATCCCGGTGG TGTCCGCCGG 
    CGAGGAGCTG ATGGCGGGGC GGACGTACTT CGTCCTCCCC GCCGAGCGCT 
    TCTCCTGCTT CAAGGTGCTC ACCGCCGCGG CGCTCGCGTC GCTGTCGCCG 
    GCGCCGTCGA AGAAGGTGTC CGTGGCTGGG CCGGGGCAGT GCCCGTTCGA 
    GTACGTCAAG GGCGAGGGCG GCGCCACGCT CATCCGAGTC CTCCCGGAGT 
    TCATCGAGAA GGTGATCAGC TGCGACGAGA ACGGCGGCGG TGCGCGCCGC 
    CGGAAGCCGT CGACGACGGC GACGGCGACG GCGACGGAGC TGTGCAGCAC 
    GCCGGAGCTG AAGCGGCATT ACGCGCTGCT GATGGGGCGG AGGAACCAGC 
    CGTGGTCGCC GAGGCTGGAG ACGATCTCGG AGTGCAACAA GACTAGGAAG 
    CTGCTACTGC GGACGCTGGC GAGGCTCTTG TCGTCGCGAT GAGCGGCGGC 
    GGCGGCGCGT CGAACTCGAA GACGACCACC ACCACACTAC GCTAGTTGTA 
    GGATTCTAGC TGTGCAGATA ATACATAGAA GGATTCCATT CAGACATGTA 
    CAGTCAATTG GCGAATGGAG ATTGAGATTA AGACGCACTG TTCAACTAAT 
    TAGATGGGTG AAACTGCGAT ATATATAGAG CGAGAAAACA CGGCACAAAT 
    ACACACTTCT TTGTAAATTA AGTATTCAAA GTCTCAAATT AAACGATACT 
    TCCTCCATTT CAG

    Gene models with high sequence identity

    1. AT5G12340.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28190.1); ...
      E-value: 2e-22; Score: 103.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G12340.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR