K20016

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K20016

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Elements::Others::Fe

Original: K20016

Determination of introduced cDNA(s)

J033075I20 - Rice Full-length cDNAs - Original: J033075I20

full reading [+] show sequence

AAAAAAACCC CCGATCCCCC CTTCCTTCAA GCGGTCGCCG GTGGCGGCGA 
TTTCCGCCTT TTTCTGCGGC GGCGGCGGCG GCATTCGCAT GGCGCACTCA 
GTCGCCGGCA CCGCACCGGG GTCTCCTCCA TCGGCGAGTT CTCGTCGCCC 
CCCTCGCTCC TCCGTTCTGT AATCCGCGCG GAACCATCGG GCCGATATCA 
TCTTGCAAGA TTCCCCCATT GGATTTACGG TCAAATCGGA GAAGCACATG 
CAGCACATCT TTCATTGATG GCCGCATTGA AGGATGCTCC CCAGTACAAA 
TCACAGCAAG TGTAAACACC TCCAATGCGT CCTCAACATG GGTTGGGTCT 
CTGATCCCCT CATCGAGAAG ATCAACTGAC AAACCATATT CTTGGTACTG 
CCTCCATGCC CATTGTGCCA AGCAATAGTA CTCTCCACCA TCATTTGCCA 
CTCGACCAGT TATGATTTCC AGAAGGACCA CACCAAAGCT GTAGACATCG 
ATCTTCTCGT TTACCTTGAG CCGATGTCCG TATTCTGCAA AGTGTAAACA 
ATTTAGTGTT TCAGGTAATA TGCAAGTATA TACTCATCAA AGTTACTCTT 
TTTCTCTCTG ACCTGGTGCC ATGTAGCCAA AAGTTCCAGC TATAGCAGAA 
AATGACTCGT CGTCTCCAGC TTTGAGAAGA ATCTTTGCAA GCCCAAAATC 
TGCCATCTTT GCTCTGAAGT TGTGATCCAG AAGGATGTTG GCACACTTGA 
CATCTCGATG CACTATGGGA GGCGAGCAAT GGTGATGCAT GTAGCAAAGA 
CCTCTCGCTG AGTCGATGGC AATTTGCAAT CTTGTTGGCC AATCCAGAGG 
TCCTGGCGCA CCAATTCTTT CCCTCTGGTG AAGCCATTGA TGTAGGCTGC 
CGTTTTCCAT GTACTCATAG ACAAGAAGCT TTGCATCTGA ACTTGAGATG 
CAGCAGAGCA GCTTGACAAT GTTTGTGTGC CTGATCTCTC CCAATATCTG 
AGCCTCTGCA AGGAAGTCCT TCTCCAGTTT GTCATCAAGA TTCGGTGTGT 
TCCATATCTT TTTGACGGCC ACCATCCTTC CACCACTTGC TCTATCCCCA 
GCATAAACCC GGTACACCTT GCCAGACCTG CCACTTCCAA TCCAATTCTG 
CTCGTAGAGC CCAGAAAGAA TGTTAGTTGT GGTGAAATGC AATATGTGGA 
ATGGTGTTAG CTTCCATGAC AAGTGGTCTT GAAGCTTTTT TCTCCTTAAG 
AGCATGATAC CAAGCACTGC TGAACCCAAA AGCATGATGC TGGCAACAGC 
AGAAAAGAGG GCTATAAGCC TCCTAAATAG ATCATTGCCG TTTGTTCTTG 
CCCTGCAGAT AGGGAAATTA TGAACTGAAT TGTTTGATGA TACACAGAGG 
CCTGGGTTGA ATAGAAAGCT TTGTTCATAT GCTTCGTTTT GCAGTGATAT 
CGGAATTTCC CCGATGAGTT GGTTCATAGA GAGATTCAGA AAATTGAGCC 
TCAGCTTATT AAAATCCTTT GGGATTTCAC CTGATAATTT ATTCGACGAG 
AGATCAAGGA TGGTTAGTAC TGTCATAAAC CCAAACGCCG CTGGGATATT 
ACCAGATATC TGATTTCCAC TTAGGTTAAG TGTGTTTAGC CTCGCCAGCA 
CTCCAATTGT CATGGGTAGT GAGCCACTAA TTTGATTCCT AGAGAGGTCA 
ACTTCTGTGA CCTGAGAAAT GTCTGTCAGA TCCCAGGGAA TTTCACCAGA 
CAGCAAGTTG TTTGCTGCTA TGAATACTTT CATTTTTCCT GCCAATGTTG 
GAATAGGACC TGAGAATTTG TTGTTGCTGA TGTCAAGACG TGTAAAGTTC 
CATGGGAGCT GTTTGGGGAA TGTGCCAGAG AACCTGTTGT TTTGTATCAT 
AACTGTACTT AGCTGATTTG TCACCACTGA CCAAAGACTC TTGGGGAACT 
CTCCAGAAAA ATTGTTGTTG TACATCATCA AATTGTTCAA CAGATAGCAG 
CCGTCCAATG ACGATGGAAG TTTTCCAGAA AAGCTGTTAT TGAACACAAC 
AATGTCATAT AGCTTCCTGT TGAAGCAGAG GCCTTCTGGT AGCTTCCCAG 
AGAGGTTATT ATTGGAGACC TCAAGATTGG CCAGTGGTGA GTGCTTACCA 
AGCTCTGGTG GGAGTGATCC AGAGAGCATG TTACCGAATA ACCGAATGTC 
AGTAAGCTTT GGCAGCAGCC CAACGCTTGG TGGTATTGAT CCACTCAGCT 
TGTTAAAGTA GAGAAACAGT AAGGTAAGGT TGGTAAGCTT ACCAAATCCA 
TTTGGTATGG TTCCTATTAA TTCGTTTGAA GAAACATCAA TCTCCACCAA 
GTTCAAGGCA CTGACATTGG GTTCAATCTC ACCGGTGAAT CCGTTTGCAT 
ACAGGTACAA ATTCTGAAGT TTCTTATGTT GCCAGATCCA CGTTGGAATT 
TTTCCTTGCA GCTTGTTTGA TGAAAAATCC AAGAGGTTGA GCTCTCTGAG 
GCTGGACAAG TTTTCAGGGA TTTCACCGGT AATATTCATA TTTGACAGCC 
ACAAGTAAGT CAGACGTGTC AACCTACCAA ACTCCACTGG AAAGGGAGCC 
GGTACAAATG GATTGACTGC TAGTGTCAGC CTCTCAAGGT CAGCAAGATT 
GCTGATATCC TCAGCTGGGT ACCTCCCATC AAACTGATTG GTGTCAAGGA 
GCAGTGACTT CAGCCTTGGG AACAGTCCAA TTGATGGTGG AATTCTGCCT 
GTGAAGTGAT TAGATGATAG GTTGAGATGC TCGAGCAGTG CTGATAGATG 
ATTTAAGTCA CTTGGGAGTT GTCCATCAAA TGCGTTGTTG GAAAGATCTA 
GGAACTTGAG ATTGGAGCAA TTGTAGAGCA TGGTAGGGAA TGAAGTGGAG 
AAATTGTTGT AGGAAAGGTC CAAGCGGGTG AGGTTCTTTA GGAGACAAAT 
GGAGGGAGGA ATTGGTTTGA TGAAGGTTTG ATTTGGTAGA GAGATGCCAA 
TCACCGCACC ATTTGTGCAT GTAATTCCTT CCCAGTTGCA GTGAGCAGTA 
GTAGTGGAGT TCCATCTACC TAGCGCAGGT GAGCTCCCCC AATGGTTCTT 
GAGCTCAAGG AGGATTTGGT GTTCTTCATT AGATTGATTT GTGGACTTTG 
GGTAGGATTT GTGCAGCAGA GAAAATGATA TCACAAAGAA CAGGAAGAAG 
TTCACATACC GTTTGTTGGC CATCTCTGCT GAATCCTTTT GGCTGGAAAT 
CTCTTGCCAG GAGAGGAGTA ATGCATGGGT GTTTTGGGTG TTTAGCTATA 
ATCTCCAATG CAAGTGGATG CTATTGTATT GTCACCAGTC ACTGTGAATT 
CCTTTTAGAA TTGGGCATAT ACTGGCAAGT CATCCATTCG ACTATTTGAT 
TTTGAGCTAA CATGGAAGCC TTGCTGTTAA TGCCTTTGTT TATGTGGTCC 
TCCCAGCTCC AACGCATCGT TAGTGTCTGA TGACATGGAT GACTTGGAAC 
AATGGAACCA TTATGACCTT TGGGCGAGGG AGAATTTACC ACTTCTGCTT 
TGGAACAGTT TAGACATGAA CAGGGATTTT TACACTTGCC TGTGTAAACT 
ACACGTCTTT GAGAAAATTT CAGGTAATTT ATACTGCTTC ATACAAAACA 
AAGTGCTACC TAGTTCAAGT TACTGTCTTG TTGAATATTA TGGGTCGTGG 
TGTAAATCTT CTCTGTTTGA TTAAAGATTG TGGGGTGGGG TAAAATTGAA 
CCGACATTAG TTGCTTGGAG TAACCTATGT CCTAACTGTC AGTCCACTTA 
TATGAAGTTC ATATGGTAAC CGCTTTGGCA TCCTGCTGAG ATAATGTTCA 
ATTGGCTGTT GCTACTTTTT GCATCTTGAA TTATTAAAAC TTATTTGTCT 
GC

Gene models with high sequence identity

AT5G25930.1 [+] show detail - Protein kinase family protein with leucine-rich repeat domain
E-value: 0; Score: 776.00

InterPro Scan Digest

Program	Description	E-value
Gene3D	no description	3.2e-31
Gene3D	no description	1.7e-41
Gene3D	no description	6.6e-40
Gene3D	no description	2.1e-15
Gene3D	no description	1.6e-29
Gene3D	no description	4.7e-10
superfamily	L domain-like	9.2e-57
superfamily	Protein kinase-like domain	3.5e-55
superfamily	L domain-like	5.1e-36
superfamily	L domain-like	3.3e-25
superfamily	Protein kinase-like domain	6.6e-12
HMMSmart	Leucine-rich repeat, typical subtype	11
HMMSmart	Leucine-rich repeat, typical subtype	150
HMMSmart	Leucine-rich repeat, typical subtype	75
HMMSmart	Leucine-rich repeat, typical subtype	120
HMMSmart	Leucine-rich repeat, typical subtype	73
HMMSmart	Leucine-rich repeat, typical subtype	60
HMMSmart	Leucine-rich repeat, typical subtype	55
HMMSmart	Serine/threonine-protein kinase domain	5.5e-10
HMMSmart	Tyrosine-protein kinase, catalytic domain	2e-10
ProfileScan	Protein kinase, catalytic domain	30.464
ProfileScan	Protein kinase, catalytic domain	8.81
HMMPfam	Serine/threonine-protein kinase-like domain	1.3e-35
HMMPfam	Leucine-rich repeat	0.11
HMMPfam	Leucine-rich repeat	0.42
HMMPfam	Leucine-rich repeat	0.054
HMMPfam	Leucine-rich repeat	0.18
HMMPfam	Leucine-rich repeat	0.12
HMMPfam	Leucine-rich repeat	0.042
HMMPfam	Leucine-rich repeat-containing N-terminal domain, type 2	3.1e-10
HMMPfam	Serine-threonine/tyrosine-protein kinase	7.7e-06
PatternScan	Protein kinase, ATP binding site	0
PatternScan	Serine/threonine-protein kinase, active site	0
HMMPanther	SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE	1.1e-20
HMMPanther	LRR RECEPTOR-LIKE KINASE	6.1e-177
HMMPanther	SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE	6.1e-177

See the detailed result >

AT5G25930.1

Model type: Protein coding
Short Description: Protein kinase family protein with leucine-rich repeat domain
Computational Description: Protein kinase family protein with leucine-rich repeat domain; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: receptor like protein 52 (TAIR:AT5G25910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR