K20046

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K20046

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K20046

Determination of introduced cDNA(s)

  • J023139M04 - Rice Full-length cDNAs - Original: J023139M04

    full reading [+] show sequence

    Nucleotide sequence: J023139M04 - full reading 
    GACCGCAACA ACTCTCGGCA GCACATCTCC CCTCTTCTTC CTGAGTACTC 
    TGGGCCAATC TGCCGCCCTC CGCCGCACGC GCCATCCGAT GGAGGAGGCG 
    CAGGCCGCCG TGATGGCGCA CCTGGACCAG GTCTCGGGCC TCGTCCAGGC 
    GCTCTCCGCC GAGCTCCGCC GCGGGATCGG CCCCGCCGCC GACGGCCTTC 
    TCGCCTTCGT CCGCGCCGTC GACTGGACGG AACCATGGCT GATTTGATTG 
    ATGGTATTCC ATGCGACTCT GTTGCTCACG GCCGTCGGGT TGAGGAGGAA 
    TGCCAATTTC CAGCTCTTCA TGCTGTTTCT TGCCTATTCA GGAGTTTATC 
    TTGCTGAAAA GATAAATAGC TATATGGCAG AGCACTGGAA GAGCATTGCC 
    ACACGAAATT ACTTCGACCG CGCTGGAGTT TTTGTTTCTG TCGTCTGGTC 
    GGGTCCCCTT ATCTTCATAT CTATGGTCAT TGTGGTTAGC TCCCTTATTA 
    CATTATGTCG GTTGATGGCG AAATGGAAGA GAGCAGAACT AAGGCATCGG 
    GCTCAGCTTG CTCGTGACAA ACAGGATTGA CTGAAAGGTT CCTTAGTCTG 
    GTAGAAGAAA TGATTAGAGA CATGCGTCTT CTAGAATTGT AACTGTTGGT 
    GTTTAATCAC CTGATGTTTT TCAGTTGCTT GCTGCTAGTA ACTTACTGCG 
    TCGGTTATAT TCTGGTGTTC ATGAACTCTA GTAACAGCTA AAAACAGAAA 
    TACTAGACCC AGTATCTGAT TTCATCATGT TTTGGTTCAG TAGCCACGAA 
    CATGGATGTG TAATTTTATT TAAAATCGAT TGTGATAAAT TGC

    Gene models with high sequence identity

    1. AT1G34350.1 [+] show detail - unknown protein; Has 192 Blast hits to 192 proteins in 79 species: Archae - 0; Bacteria - 0; Meta...
      E-value: 2e-46; Score: 182.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther SUBFAMILY NOT NAMED 0.00042
    HMMPanther FAMILY NOT NAMED 0.00042
    HMMPanther SUBFAMILY NOT NAMED 8.2e-46
    HMMPanther FAMILY NOT NAMED 8.2e-46

    See the detailed result >

    AT1G34350.1

    Model type
    Protein coding
    Computational Description
    unknown protein; Has 192 Blast hits to 192 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR