K20639

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K20639

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K20639

Determination of introduced cDNA(s)

  • J023072F08 - Rice Full-length cDNAs - Original: J023072F08

    full reading [+] show sequence

    Nucleotide sequence: J023072F08 - full reading 
    GCATCTCCCT CTCACGGCCT CGCGTCCTCC TCCTCCCAAT TTTTTTTCTC 
    CCAAAATTCC TCGCTCTCGA GCTCCCCGGA TCCCGAAGGC GCGGCGATTT 
    CTTCGATTCG GCCGCGGGAA GGAGGAGAGG TGCTCCGATT TGATTGCGGC 
    GGGGCGCCGC CCGCCGCGGG GTGATTTTGG GCGGCCGGGG AATGCTCTAC 
    CTCAAGCAGC CGGGCGCGGA TTTAGGGTTC CGGCCGGCGG CGGCGGCGGG 
    GCTGTGATCT GCTGACCAGG TCGGCGGATG CGAGGTTGAG CCGTGGGTAG 
    TCGGCCGGCC ATGGCGGTGG AGGCGGAGGC GGAGGTGGAG GTGGAGGTGG 
    AGGCGGGGGG ATGCCTCCTG CAGAGCTTCG AGCTCTACGA GGCCGAGTCG 
    AAATTCTATA TTCTCGGAAC TAACACTGGC AAAACATCAT GGAAAGTACT 
    CAAGATTGAT AGAATCGAAC CATCAGAGCT CAACATTGAT GAGAGTTCAA 
    CTGTGTACTC ACATAGTGGA TATCTTGATC TGCTAAAGGT TCTTGATGAA 
    GACCACAGGT CAACTGGTGG AGTAAAATTT GTTACAAAAT GTTTTGGAAT 
    CATCGGTTTC ATTAAGTTCC TCGGACCTTA TTACATGCTA ATCATCACCG 
    AGCAGAGAAA AATTGGGGCT ATATTTGGCC ATCCAGTTTA CCAAGTTACT 
    AGGACTGCAA TGATTGAGCT GTCAAATTCC GAGTCGAGGG CAAAATTTCT 
    AAATTCCAAG GATGAAGACA GATACAAGAA GCTCTTGCAG ACAATTGATC 
    TTAGAAAGGA CTTCTTTTTT AGCCACTCGT ATAATATCAT GAGAAGTTTC 
    CAGAAGAATT TTAATGATCC AAAGGAAGGA TGGGACCTGT ATGACACAAT 
    GTTTGTATGG AATGAGTTTC TAACACGAGG GGTTCGCAAC ATTCTAAAAA 
    GTACCATATG GACTGTTGCG TTGGTCTATG GCTTTTTTAA ACAGGATAAA 
    CTCGCAATAT CTGGGAAAGA CATTATGCTG ACGCTTGTTG CTAGACGCTC 
    GAGGCATTAT GCTGGCACCA GGTATTTAAA GAGAGGTGTG AATGACGAGG 
    GTAGTGTAGC AAATGATGTT GAGACTGAGC AAATTATTTT TGAGGACATG 
    CTTGGACCAA AGCAAATAAG CTCTGTTGTG CAGAACAGAG GTTCCATTCC 
    CCTATTCTGG TCTCAGGAGA CATCCAAGCT GAATCTTAAG CCTGATATCA 
    TATTGCATGA AAAGGACAAG AATTATGAAG CTACCAGACT TCATTTTGAA 
    AATCTTAGGA TAAGATATGG AAATCCTATA ATCATCCTAA ACTTGATTAA 
    GAAACGTGAG AGGAGGCCAC GTGAATCTAT ACTCCGCAGT GAATTTGATA 
    AAGCAATAAA GATTATAAAT AATGATCTAC CAGGGGAAAA TCATCTGCGA 
    TTTTTACATT GGGATCTTCA TAAAAACTCT CAAAGAAAAA GTACAAATGC 
    CCTCCAAATG CTTTTGAAAG TGGCTTTTGA AGCTCTGAAC TTGACAGAGT 
    TCTTTTACTA TCAAGTTCCT CCAGCTCGAA GGGCTGAGAG TTCCTTCAAT 
    TTGCATGCTC CATTGAAGAA TGGTTTTGGT CCTCATGAAT GTGATGACAG 
    CAACAATGAT GATATCACAG ACTGTATCGA TAATATTGAT GATATGTCCC 
    AAGAAGATAC TTGTGGCAGT TCTGATACTT CTGGTAATGG AACTGCAGAA 
    GATATAGCCG AGGGCAATGG ATCTATATCA GTAAAGCCTC CAAAATTTCA 
    AAAGGGTGTC CTACGTACGA ACTGTATAGA CTGTTTGGAC CGTACAAATG 
    TTGCTCAGTA TGCGTATGGT TTAGCTGCTC TTGGACATCA GTTGCATGCA 
    CTTGGTTCTA TAGAATCCCC TGAACTTGAT TTGGACTCCC CCTTGGCTCA 
    CCATTTGATG CATTTTTATG AGCGGATGGG TGACACACTT GCTGTACAGT 
    ATGGCGGTTC AGCTGCTCAT AACAAGATAT TCTCTGCAAA GAGAGGACAC 
    TTAAAGTTCG CTATCCAGTC GCAAGAGTTC TTCAGGACAC TGCAAAGATA 
    CTACAGTAAT GCATATATGG ATGCTTACAA ACAAGCAGCA ATAAACTTAT 
    TTTTAGGATA CTTCCAGCCA TGTGAAGGTG AACCTGCACT TTGGGAGTTA 
    GAACCTGTTG CTGGGGAGGG TGTCCTTGGT GAGAATGCAA GTAAATTGAT 
    GAAAAGGGCA AGGTCAGATG GCAGCATTCT TCGGAAAAGC AACGCATCCA 
    TGTCCAGCAA TGGTCGAAAT GGAGTGTTAA AGTCATCATT TATTGATTCT 
    AAAAGTGAGC TTCAATCTCC AAACAGTTCT TCTGATGCAA TAAACGAAAT 
    TTCATCAGCA CCTGATAATA CAGTTACAGT GTCAAAATCA AGGTATACTC 
    CCACGGAACC TCATGTTAAG CATGTAAGCT GTGAGCTTGA TTACTGCAAT 
    GGTTCTGGTG ATTCAAATTT CCTGGACATT GACTGGCTTT CATCTTCAGA 
    CAACGAAAGG CCAACAACCA TAAGTACTCC TGATGTGAAT GCTTCAGCCG 
    ATAGTGTTTC TGCTGGTGTA TCCTCTAGGA GAACGGAAGA TCATGCTGCA 
    GAGATTCAGG CTCAGGGGTT ATCGGAGCGT TTTGTTCAGT GGATTGATCA 
    AGGGGAGACC TTTTGGTTCT AATATTGCTA GATGATTTCA TCACTCATAG 
    CCAAGCTAGA CGACGGCAGT CGTTATGATA CCACTGCAAG GAGGCGTAAG 
    ATGTGAGACA ATATCGCCCT TACCATATTC TCCTTGTGAC TCATGACTCT 
    CCAAGGGGTC TGACCATCCT CCAGAGTCCT CCAGGGAAGT GTACCATTCT 
    GTTTATTTGT TGAGCTTGAT CACCGGTTAT ACCTCTAGGG GCGAGTAGAT 
    AGGCATTGTT CTTATTTTCT TAAAGGAAGG AAAGAAAGAA GGTAGGTAGT 
    ATATTATTCT TTTGATGTTG TACCATTGTT CAGCCATTCT CATTGTTGTA 
    AATATATATA TGATGACCCA AGTGTTTTCC CTTTTTTCTT GAGTTGAGGT 
    GGACATGAAA GCACCATTTT TCCCTCAACT TGTTTCTTTT CTTTCTTTTG 
    CTGGGATCTT ATGAGATCTT ATGTACATGT ATTTCATTGC AACAGAAGAT 
    ATGCTATTGT GTATTTTTGT ACCC

    Gene models with high sequence identity

    1. AT3G43220.1 [+] show detail - Phosphoinositide phosphatase family protein
      E-value: 0; Score: 723.00

     

    InterPro Scan Digest

    Program Description E-value
    ProfileScan Synaptojanin, N-terminal 72.075
    HMMPfam Synaptojanin, N-terminal 5.2e-86
    HMMPanther SUPPRESSOR OF ACTIN (SAC)-RELATED 1.1e-205
    HMMPanther INOSITOL 5-PHOSPHATASE 1.1e-205

    See the detailed result >

    AT3G43220.1

    Model type
    Protein coding
    Short Description
    Phosphoinositide phosphatase family protein
    Computational Description
    Phosphoinositide phosphatase family protein; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT5G20840.1); Has 2131 Blast hits to 1660 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 800; Fungi - 658; Plants - 325; Viruses - 0; Other Eukaryotes - 348 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR