K21206

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K21206

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K21206

Determination of introduced cDNA(s)

  • J013033I23 - Rice Full-length cDNAs - Original: J013033I23

    full reading [+] show sequence

    Nucleotide sequence: J013033I23 - full reading 
    GACCCTTCTC AGCCAGCTTC GCCTCGCTCG CTAGCTATCC ATCTCTTCCT 
    CCTCTTCTTC TCCCTTCCCT TGTTTGCTTG GAAGGAGAGG GGGAAGAAAA 
    GTAGGAGGAC GCGGTTGCGG GTTGGTCCAG ATCTAGGGCA AGGCGGTGGC 
    CGGAGTTTGA GCTGGGCCCG CCGGCGGCGA GATGAAGCAG TCGATGCGGA 
    GCCGGCAGGA GCCGCGGCGG GTGAGCAACG GCGTCATCAT CGCCGCCATG 
    CTGCTCTCCC TCTGCGTCCT CAGCATCGTC AAGGCCAGAT ACTGCTCCAC 
    CCCCTTCGTT AAGCCCGACG ACCAGCTACA GGAGCAGATG AACTCCAGCA 
    TCAGGATGGA GACCGACGAG CCGGCGACCA TGGCGGCGGG AGAGCAAGAG 
    GAGGACGAGG AGGAGGAGAG CTCTGGCGGT GGCGGCGCTG AGCCTGAGGT 
    CAGCGCCACC CCTGCCGTCG TGGTCACCGC CGCAGCCGGC GGCGGCGGCG 
    GCAAGAGGAA GCCGACCTGC CGCATGACGA GCAAGCGGTC GGAGCGGTGC 
    GAGGCGAGAG GGGACATTCG TGTGGAGGGG AACGCGTCCA CCATCTACAT 
    CGGCGGGATC GACAAGGAGT GGAAGACGAA GCCGTACGCG CGGTACCACG 
    ACCCCGTCGC CATGGCCGTC GTCCGCGAGT TCACCCTCAA GCCGGTCACC 
    GAGTCGTCGC CGGCGTGCAC CAGGAACCAC TCGGTCCCGG CCTTCGTCTT 
    CTCCAACGGC GGCTTCTCCG GCAACCTGTA CCACGACTAC ACCGACGTGC 
    TCGTGCCGCT GTTCCTCAGC ACCCACCAGT TCAAGGGCCA GGTGCAGTTC 
    TTGCTCAGTG GGCTCAAGCC ATGGTGGGTG AACAAGTTCA ACCTCTTCTT 
    CAGGCAGCTC ACCAAGTACG ACATCCTCGA CATCGACAAC GACAAGGACG 
    TGCACTGCTT CCCCCGGATC GTGGTCGGCG CCACCTTCCA CAAGGACATG 
    GGCGTGGACC CCAAGCGCTC GCCGGGGCAC GTCTCGGTGG TGGACTTCAA 
    GCGCGCGCTC CGCCGCGCCT TCGGGCTGGA GCGCGTCGCG GCGTCCCGAG 
    GCGGCGCCAC GGGGAACGGC AAGCCACGGT TGCTAATCAT TTCCCGCAAG 
    AACTCGCGGC GGTTCCTCAA TGAGCGGGAG ATGGCGCAGG CCGCTGCCGC 
    TGTGGGCTTC GAGGTGCGCA TTGCCGAGCC CGATCAGCAC ACCGACATGT 
    CCACATTCGC CCAGCTCGTC AATTCCGCCG ATGTCATGAT CGGTGTCCAT 
    GGTGCTGGGC TCACCAACAT GGTGTTCCTC CCCCGCGGCG CCGTCCTCAT 
    CCAGGTGGTG CCATTCGGCG GCCTAGAGTG GCTCACCACT GTCACCTTCA 
    AGAATCCGGC GAAAGACATG GAGGTCACCT ACATGGATTA CAATGTGCAG 
    CTGGAGGAGA GCTCGCTGAT CGATCAGTAC CCGCGCAATC ACCAGGTGCT 
    CACTGATCCC TACGCCGTGC ACAAGCAAGG CTGGGACGCG CTCAAGACGG 
    CGTACCTGGA CAAGCAGAAC ATCAAGATGG ACATGGACAG GTTCAAGAAG 
    ACATTGCAGG AGGCGCTCGA CAGGTTGCCG CCAGCATGAG AGCTTGATGA 
    ACTGATGAAA GCTCAAGCCC ACGAGGTGGT GGTGGTGGTG GTGGTAGATA 
    GATAGGTTGG TGTATCTATC TGTGCCTTCT CTTGCTTAAC TTATTTTTCC 
    TTTTGAAATT CTTTTTACGC CTTCTTCTTC CTTTAGCAAC ATTCATTTGA 
    TCTGTTGTTT TGGAAAAGGA AAAAAGAGGA TGAACAAGAA CATCATGTTA 
    CATATGCCTA GCTGATGAGT AATTTATACC CTTTGTGATT ATTAATTGGT 
    TGTTTATTTA CAAGTAAATG TCAAGATACA AAATTGTGGA TTACTAGTAA 
    GTATC

    Gene models with high sequence identity

    1. AT3G18180.1 [+] show detail - Glycosyltransferase family 61 protein
      E-value: 7e-88; Score: 322.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Glycosyltransferase AER61, uncharacterised 1.1e-85
    HMMPanther GLYCOSYLTRANSFERASE 3.1e-92
    Coil coiled-coil 0

    See the detailed result >

    AT3G18180.1

    Model type
    Protein coding
    Short Description
    Glycosyltransferase family 61 protein
    Computational Description
    Glycosyltransferase family 61 protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Glycosyltransferase AER61, uncharacterised (InterPro:IPR007657); BEST Arabidopsis thaliana protein match is: Glycosyltransferase family 61 protein (TAIR:AT3G18170.1); Has 763 Blast hits to 763 proteins in 164 species: Archae - 0; Bacteria - 23; Metazoa - 306; Fungi - 8; Plants - 399; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR