K21610

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K21610

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K21610

Determination of introduced cDNA(s)

  • J013070L01 - Rice Full-length cDNAs - Original: J013070L01

    full reading [+] show sequence

    Nucleotide sequence: J013070L01 - full reading 
    TGGCGTGCAC TCCACCCAAA AACCCTAGCC CGCCGCCGCC TCTCCCCTCC 
    GCTCGCCGGA GCTCGCCTCC TCCTCCTAAT CTTCTCTCAG TAACGCGTTG 
    GTTCGATCTT CTTCGGCTCC CGATGGCTAT GGCGCAGAGG GGATTGGGCC 
    TGCTCCGGCG ATCCCTCGGG CTCGGGCCCC TGTCCACGCA GAGAGCCCTG 
    AGCAGCACCA GCCCCGCGGC GTCCGCGGAG GGGGGAGCGG CGGCGGCGGC 
    GGCGGCGGAG GTGGCGAAGG AGTCGAAGGG GAGGAAGAAG AAGAAGAACC 
    TGTTCGACGT GGTGCAGTTC CTGCCGTCGT GGGGCGTGGG CTACAAGGTC 
    GCCAAGACCA CCTGGCGCGA CGTCTCCTAC CAGATCACCA AGATCAACCT 
    CTACAAGGAT GGTCGTCATG GGAAGGCGTG GGGGATTCGC TACAAGGCCG 
    GTGTTCAAGC TGCTGAAGCG CCAACAAAAA TCAGTGGGGT AAACAAGCGT 
    GGGTGGAAGT ATATAAAAGA ATCGCAGAAG AAGTTACAAG ATACCCCCAA 
    AGTAGAAACG CCAGTCACTG CTTAAGCTGA AACTGTGGAT GTCTTGCTTG 
    TCTTCACTGC TGAAAGTGTT TTAGATGGCT GTTGCCAGAT GAACAGAGCG 
    CCACTGTAGA ATGGATGGGT TCCTTTTGGT TGATCGATGA TGATTAAATT 
    TGCCAAGGTG TTTGATATCC TTTTCTTTTC ATTTCCATAA TGCACTTGGA 
    AACTAGTGAC AATGGCATGT AGTTGTAGTC TTCTAATTCA TCTTTGTTTC 
    TGTCATATGT TTACAAGGGG CTGGACATTC AGACTGATGT CCACTGGTAA 
    CACCTGAACT TTTGGGCTGG TGTTAAACTG TTGGGATCAT TGATCGGCAC 
    ATGTACTCTC TAATACTTAA CTGTTAATCT GTTCTGCTCG

    Gene models with high sequence identity

    1. AT5G58990.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52370.1); ...
      E-value: 6e-30; Score: 128.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G58990.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR