K21705

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K21705

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K21705

Determination of introduced cDNA(s)

  • J023109G16 - Rice Full-length cDNAs - Original: J023109G16

    full reading [+] show sequence

    Nucleotide sequence: J023109G16 - full reading 
    GGCTTTCCTT GTTGGGAATT CCACGTACGG AACGGAGCTT GGATTTGGAG 
    AGGAGAGGAG ACTGCCTCTG CCTGGCTCTC CCTCGCCGCC GGCGCACGCC 
    ATTCTGGGCC TCTCCTCTTT GCCGATTGAT AAGAGGAGAA GCCGAGGAGC 
    CTCCCTGTTT CAATTCGTTC CGGCGGGTCG CTGCAATCCG GCAGCGAAGT 
    TGAGGTACAG GTACGCGCGT GCCGTGTAGC AGTCGATTGA TTCATCTCCT 
    CTCCTCGCCG GAGATCTCTC GGGCGCATTG CCCATTTGCC TTGCCTGGCG 
    GCGGTGGGAG GGATGGAAGA GGAGGCGGGG GCGGAGGTGC CGTTGCTCAA 
    GATCAAGGGG GACTACCACC AAGGTTGCCC TGGCTGTGCC TATGACCGCA 
    AGAAGGAGGT CTACAGGGGA TTGCCTTACA AGGAGTTCCT CTATCTCTGG 
    ATGATCTGCC TCACCGCCGC TTTACCAATA TCATCATTGT TCCCCTTCTT 
    GTACTTCATG ATAAGAGACT TGCATGTTGC AAAAAGGACA GAAGATATTG 
    GGTTCTATGC CGGCTTTGTG GGTGCTTCGT TTATGTTCGG TCGATGTTTG 
    ACTTCAACTA TTTGGGGAAT AGCAGCAGAT CGTATTGGGA GGAAACCAGT 
    TGTTGTGTTT GGCATTTTCG CGGTGGTCAT ATTTAATACG CTATTTGGGC 
    TTAGTTTCAC CTATTGGATG GCAATAGCTA CAAGATTCCT TCTTGGTGCT 
    TTAAATGGTT TACTTGGGCC AATAAAGGCC TATGCTATTG AAGTTTGCCG 
    ACCTGAACAT GAAGCTCTTG CATTGTCACT TGTTAGTACG GCATGGGGAA 
    TAGGTCTTAT AATTGGTCCA GCTATTGGAG GCTACCTTTC ACAGCCTGCA 
    GAGAAATTTC CCAATGTCTT TTCCCCTGAC TCACTGTTTG CAAGGTTCCC 
    ATATTTCTTA CCCTGCTTGT GCATATCAGT CTTTGCTGCT GTTGTTCTCA 
    TAGGCTGCAT ATGGATGCCG CTTTGGAGAG CCATTTGATT GATCCAGAAG 
    AAAAGGCTGA CCAAAATGGT AGTTTGGACT GCAAGAAGAG CTTATTGAGC 
    AATTGGCCCT TGATGTCCTC CATAATTCTT TATTGTGTCT TCTCCTTTCA 
    TGATATGGCT TATACAGAGG TATTGTTCTT GCTATTGTCT ACGGATGGTT 
    TGCTACTGCT TTGCATATAA ATTGTTAGCT CATGTGGTTT ACACTCAGTT 
    AATCACTAGA AATAATATGC ATTTCAGCAG ACAACGTGTG ATATTCAGCA 
    TGATTTTATA TTGAAATATA TGCCAAAATA TACAAGCTTA TAATGATAAT 
    AATAAAGTGT ATGATGATTA CACGGGATTA ATATATTATT TAGTTACAGA 
    TGATGCAATA TTAAAGACTG GTGCAAAATA ATTTGTACTT CAAAATGCCT 
    TTAGCATAAA AATATTCAAC TTGTACCAAT CACTGGTGAA CTAGGATTGG 
    GCATTTTCTC TAAGACTTGC TACAGTTATA AGTAGCTTCT ACGGTTCTAT 
    TGGTTTTAGA TTCACTTAAT GCAGATATCT GCTAGATTTT TGGAATTTGG 
    ATTACTTGTT TAAAACACAC TTTAGCATGT GTTTCTTTTA GCTGGGCTGG 
    CTGAAGATAA GCCAACCATA GCCTGTGTTT TTAGTACTAA TGCTATTTGG 
    GATCAACTTC AGATATTCTC TCTATGGGCA GAAAGTGACA GGAAGTACGG 
    TGGGCTGAGT TTGTCATCTG AGGATGTGGG TCAAGTGCTT GCAATCACAG 
    GTGCCAGTCT TCTTGTGTAT CAACTCTTCA TTTATCCTCG TATCAACAAG 
    GTTATAGGCC ATATTAAGGC TTCTCGAATT GCAGCTATTC TGTGCATACC 
    TATTCTCTTT GCATATCCAT ATATGACATA CCTATCGGGA CCTGGATTAA 
    CGATCATACT GAACATTGCG TCAGTTATAA AAAATAATCT TGGTGTGAGT 
    ATATTTCCAT GTCAAATTTT AGGAATCTAT GTATGCAATT TTCAGGGCCA 
    ATTTGTGCAA GAAAAAGGTA GCATTGATAT TTAAGGCCTG CAGTTTGCCA 
    AGTTACAGAC ATTAACTCAG AAAGTTTTAT ACGATATTAG GATAAGATAA 
    ATATGATATA CAATTATTAT TATCCAATCT GACCTTTTTG TGGTGGAAAT 
    GGAGTTGATT ATACAAGACG AGAGCACATA TAGAATTATT TTCTCATCTT 
    ATGTATTTGC AACTTTAATG AAAATTTATC ACTGTTAATG TATAAATAGG 
    TTCTTGTTAC ACTCTGTTCT AATTTATGCT ATACTATGTT AGGTTACCAT 
    CATTACAGGC TGTTTCATCC TACAAAATAA TGCTGTGCCT CAAGACCAAC 
    GAGGGGCTGC TAATGGCTTG GCAATGACAG GAATGTCCTT TTTTAAGGCA 
    GTGGCTCCAG CAGGGGCGGG CATTGTGTTC TCGTGGGCAC AAAAACGCCA 
    GCAGGCTTCC TTCCTTCCAG GTGATCAGAT GGTGTTCTTT CTTTTGAATC 
    TCTTCGAGTT GCTTGGACTT ATCCTCACTT TCAAACCCTT TCTGGCCGTG 
    CCACAGCAGC ATGATACAAA TTAGACTGTT CAGGTATACT ACAGATCTAG 
    ATTCTTCAGA ACTTCAGATG TTGGCAATTT CATGAGCCCT GCAGCCGGCT 
    GTGAAGCGAA GGCATATAAC ATGATGCTCA TCTGGATGTC CCAGGAGCAA 
    TAGATAGAAG TGAGGGTTGG TACCTCCTTA TGCTTGTATA GTAGGTGCCA 
    GATATGCAAT TGCAGCATTT CAGCGAAAGG AATATATATA GTTGGGGGTA 
    AATGGTGGCC AAATTGATGG CTAGGTTTTT CATGGCCAGC CTACATGTAA 
    TACCGAGTAG CATTCTACTA GTATAATGTA TAGAGTACTA CATTGTAACT 
    AGTAAAACTC TGTAAGTGAC ATCAGCTTGG GAATGAAATT ATTGCCGGAA 
    TCGAGATCAG TATATTGCT

    Gene models with high sequence identity

    1. AT5G13750.1 [+] show detail - zinc induced facilitator-like 1
      E-value: 2e-79; Score: 61.20

     

    InterPro Scan Digest

    Program Description E-value
    superfamily Major facilitator superfamily, general substrate transporter 5.4e-28
    ProfileScan MFS 19.098
    HMMPfam Major facilitator superfamily MFS-1 4.7e-21
    HMMPanther MAJOR FACILITATOR SUPERFAMILY ANTIPORTER 9.1e-22
    HMMPanther MAJOR FACILITATOR SUPERFAMILY MEMBER 9.1e-22
    HMMPanther MAJOR FACILITATOR SUPERFAMILY ANTIPORTER 3.4e-75
    HMMPanther MAJOR FACILITATOR SUPERFAMILY MEMBER 3.4e-75
    HMMPanther MAJOR FACILITATOR SUPERFAMILY ANTIPORTER 1.7e-06
    HMMPanther MAJOR FACILITATOR SUPERFAMILY MEMBER 1.7e-06

    See the detailed result >

    AT5G13750.1

    Model type
    Protein coding
    Short Description
    zinc induced facilitator-like 1
    Computational Description
    zinc induced facilitator-like 1 (ZIFL1); FUNCTIONS IN: tetracycline:hydrogen antiporter activity; INVOLVED IN: response to karrikin; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Tetracycline resistance protein, TetA (InterPro:IPR001958), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: zinc induced facilitator 1 (TAIR:AT5G13740.1); Has 19294 Blast hits to 18859 proteins in 2587 species: Archae - 361; Bacteria - 14367; Metazoa - 620; Fungi - 2172; Plants - 389; Viruses - 0; Other Eukaryotes - 1385 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR