K21720

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K21720

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K21720

Determination of introduced cDNA(s)

  • J013036I11 - Rice Full-length cDNAs - Original: J013036I11

    full reading [+] show sequence

    Nucleotide sequence: J013036I11 - full reading 
    GAGTGGGGAT TTCGAAGCTG CTCTTGCTTA GCTGCGGCTG CGAGTGATAC 
    GGAGTAGTTC CGGTGATGGA GCGAGCGGAG GAGACGCCGA GGGCGCCGTC 
    GACGGCGCCG TCGGCGAGGG TGTCGATCTG GGAGTCGGTG CGCGCGTGCG 
    GGGTGTGGGG GAAGGAGGTG GACAAGGCCG AGCTGCGGAG GCAGGTCGTC 
    ATGCCGCTGT ACGCGCGGCG TGCGGTCGCG GCCGCCGTGA AGGCCAAGGA 
    CGAGGCCGTC GGCGTGGCGG CGGCGGCGGA GAGGGGCGAG GAGGGGGAGG 
    TGGAGGTGGA GGTGGAGGCG GCCGTGACGC CGGTGGTGGT GTTCGTCAAC 
    TCGCGGAGCG GCGGTAGGCA CGGGCCCGAG CTCAAGGTGC GGCTCCACGA 
    GCTCATCAGC GAGGAGCAGG TCTTTGATCT CTCTGTCGTG AAGCCTTCTG 
    ATTTCATTAA CTACGGGTTG GGTTGTTTGG AGAAATTGGC CGAACAAGGT 
    GACAATTGTG CGGAGACCAT TCGAAAAAAA TTGAGGATTA TGGTTGCTGG 
    TGGTGATGGC ACAGTTGGTT GGGTACTTGG CTGTCTCACA GATCTTTATA 
    GGTTGAAAAG AGAACCAGTT CCACCCACAG GTATCATCCC ACTTGGTACA 
    GGAAATGATC TTGCCAGATC ATTTGGATGG GGTGGCTCTT TTCCCTTTGG 
    TTGGCGTTCA GCTGTGAAGC GTTATCTCAG CAAGGCAGCT ACAGCTCCCA 
    CCTGCAGTCT TGACAGTTGG CAAGCTGTAG TTATGATGCC AGATGGAGAG 
    ATAAAAGAGT TGCCATATGC ACTTAAGAAA ACGGAACCTG CAGACTGCTT 
    GGAACTTTGC CAGGAGAATG GCACTGAGTT ACCTGAGAAA GCTTCTTGCT 
    ATAAAGGAGT ATTCTACAAC TACCTTAGCA TTGGGATGGA TGCCCAAGTT 
    GCTTATGGCT TCCACCATCT TCGTGATGAA AAGCCATATC TTGCTCAAGG 
    GCCTGTTGCA AATAAGTTGA TATATGCTGG TTATAGCTGC ACACAGGGGT 
    GGTTCTGCAC ACCTTGTACA GCAAGCCCTC AGTTAAGGGG GCTTAAGAAC 
    ATTTTGCGAC TTTACATTAA AAAAAGTCAA TTGTTCTGAA TGGGAGCAAG 
    TTACAATGCC TTCAAGTGTT AGATCCCTGG TGGTCTTAAA TTTATACAAC 
    TACGGCAGTG GAAGGCATCC ATGGGGTGAT CTTAAACCTG ATTACCTTGA 
    AAAGAAAGGT TTTGTCGAAG CTCATTCCGA TGATGGATTG CTTGAAATAT 
    TCGGTCTGAA AGAAGGTTGG CATGCTTCAT TCGTTATGGC TGAGCTAATT 
    AAAGCAAAGC ACATTGCTCA GGCTGCAGCC ATCAAGTTTG AAATGAGGGG 
    TGGCCAATGG AATCGTGCGT ATGTTCAGAT GGATGGAGAG CCATGGAAAC 
    AACCACTCCT ACAGGAGCAG TCAACCATTA TCGAGATAAA CAAAGTTCCT 
    TACCCTTCTC TGATGATAAA TGGGGAGCAA TGAGATCTTC CCCGATTTCA 
    ATCAGGGTCG TATTCTAGAT CGTTAGATTA TGTATAGTTC GGGAGCAGCT 
    GCAGGGATTA GCCATGGCCG GAGCACAATC GGGCAAAATG TACTGTTGTA 
    TCATATAAAT TATGTTGTGT CGTAGGTTAT TTCAGTGGAA ATCAAATATA 
    ACTTGATTTG TAATGTATTT TTACCGTCAA AACAAACAAA AAAAATCAAG 
    TGGAAAAACA CAATGTACTG TAAATTACTC AGATTTCCCC TCCTGTTATG 
    CC

    Gene models with high sequence identity

    1. AT4G30340.1 [+] show detail - diacylglycerol kinase 7
      E-value: 1e-93; Score: 341.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMSmart Diacylglycerol kinase, catalytic domain 1.3e-23
    HMMPanther DIACYLGLYCEROL KINASE, ALPHA 1.7e-78
    HMMPanther DIACYLGLYCEROL KINASE 1.7e-78
    HMMPanther DIACYLGLYCEROL KINASE, ALPHA 2e-112
    HMMPanther DIACYLGLYCEROL KINASE 2e-112
    ProfileScan Diacylglycerol kinase, catalytic domain 23.641
    HMMPfam Diacylglycerol kinase, accessory domain 4.2e-26
    HMMPfam Diacylglycerol kinase, catalytic domain 1.9e-24
    HMMPfam Diacylglycerol kinase, accessory domain 9.4e-17

    See the detailed result >

    AT4G30340.1

    Model type
    Protein coding
    Short Description
    diacylglycerol kinase 7
    Curator Summary
    encodes a diacylglycerol kinase. Applying a specific diacylglycerol kinase inhibitor to the growth media resulted in reduced root elongation and plant growth. Gene is expressed throughout the plant but is strongest in flowers and young seedlings.
    Computational Description
    diacylglycerol kinase 7 (DGK7); FUNCTIONS IN: diacylglycerol kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway, root development, leaf development; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756), Diacylglycerol kinase, plant (InterPro:IPR016961); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase 3 (TAIR:AT2G18730.1); Has 1643 Blast hits to 1452 proteins in 227 species: Archae - 0; Bacteria - 189; Metazoa - 1007; Fungi - 0; Plants - 281; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR