K21943

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K21943

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K21943

Determination of introduced cDNA(s)

  • J023003M16 - Rice Full-length cDNAs - Original: J023003M16

    full reading [+] show sequence

    Nucleotide sequence: J023003M16 - full reading 
    GACTCCTCCC TGCATCCCCC ACCCGAACCG AATTCCCGCA AGAGCACGAG 
    GCATCGCGGC GGCGGCGGCG GCGGCGGCGG CATCTCCGTC GATCTCCGGC 
    GAACACTTGT GCGCAGTCGA TAGGGGTTCA TCCTGTCCTG TCCGGGGTGA 
    GGCGGGGCGC CGGTGAACCA CGAGGCCGAC GACGGTCCTC CATCTACACC 
    TCTGCCGTCG CCGGCGAGCT TCGCGATGGG ATACAACCGG AGACGCGGCC 
    GTGGATCCTC CTCCTCCTCG TCGTCGCGCC GCACCAAGCA GGAAGCCGCG 
    TGGGATGATG GTCCCGGGAC ATCACTTCCA AGGCAGGAAG ACACTGAAGA 
    AGAACCAAAA GGTCCAAAAA TTCAGCTTGC TATGTGGGAC TTTGGCCAAT 
    GTGATGTTAA AAGATGCACT GGTCGTAAGC TTTCAAGATT TGGGCTATTA 
    AAGGAGTTGC GAGTGACCAA TGGTTTTGGT GGTGTTGTTC TCAGCCCTGT 
    TGGAACACAG TGTGTTTCCA AGGAAGATCG TCATATCGTG CAAAGAAAAG 
    GACTTGCTGT TGTTGATTGT TCGTGGGCGC GATTAAGTGA TGTCCCTTTT 
    GTGAAACTCC GTTGTGGCGC TCCTCGTCTC TTGCCATGGT TGGTTGCGGC 
    AAACCCTGTC AATTATGGTC GTCCATGTGA ATTGTCTTGT GTGGAAGCTT 
    TATCAGCAGC CCTCATAATA TGTGGGGAGG AAGAGACAGC GCATCTGTTG 
    CTTGGGAAAT TCAAGTGGGG TCACTCGTTC TTGTCAGTTA ACAGAGAGCT 
    GCTCAAAGCA TACTCGCAGT GTGAAAATGG CACCGAGATA ATCAATGTGC 
    AGAATTCTTG GTTGTCAAGT AACTCTAATG TTCCAAAGTC ACCTGTAAAC 
    GCGGCAGAGA AATCACACCA AAGCACAGAG GAAGGATCTG ACGCTGACTC 
    CGACGATGGC TTGCCACCTC TAGAGGAAAA CCTGAACCAC CTGAACTTTA 
    ACCAAGATGA CGAAAGTGAG GAGGAAAGTG AAAGTGATGA GTAACAAATG 
    GCGTCAGAAG GGAACATTTG GAGCTGTCCA GCACTTTTAA ATGTGTACTT 
    GAGTAAGTTA ATTTTTGGCT AAGTGCTGTG ATTCGAGCCA AAATAGGATC 
    TTCCGATGTC CAATGAAAAC AATCTTCAAT GGTCTTGAGG ACAGATCATG 
    GCTCAGAAAG AATCACAGTA CCCTTATTGC GTTGCGCTTG CTAAAATCAT 
    TTGAGTTTCT CTGTTCCAAT CTTAAGTACA GACATGAACA AAACGAAATT 
    GCAATGGACA GCAGCTGGTT TAGTCATTGC AATGGACAGG TTAGATACCT 
    GAAATCACTT TGTATTATTC CAAATTGAGC TATGATCTTA CATGTATTTT 
    TGATTGATAC ATAACACCTG CATTACTTTT GACTCC

    Gene models with high sequence identity

    1. AT5G10070.1 [+] show detail - RNase L inhibitor protein-related
      E-value: 6e-86; Score: 315.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther UNCHARACTERIZED 1.5e-89
    BlastProDom Protein of unknown function DUF367 7e-71
    HMMPfam Protein of unknown function DUF367 8.4e-55
    HMMPfam RNase L inhibitor RLI, possible metal-binding domain 1.1e-14

    See the detailed result >

    AT5G10070.1

    Model type
    Protein coding
    Short Description
    RNase L inhibitor protein-related
    Computational Description
    RNase L inhibitor protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF367 (InterPro:IPR007177), RNase L inhibitor RLI, possible metal-binding domain (InterPro:IPR007209); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR