K22312

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K22312

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K22312

Determination of introduced cDNA(s)

  • J033048K24 - Rice Full-length cDNAs - Original: J033048K24

    full reading [+] show sequence

    Nucleotide sequence: J033048K24 - full reading 
    GCTCAACAAT ATCGGCTATA CGGTTTCGCG GATCACCTGT GGTCCTGTGC 
    AGCCGTACCG TACGCCTCTG CTTTCCTCTC ACCCCACCGC GCCACCGGCG 
    AGCGGCCCGC GAGGGAGGAG GCGCTGCCGC CGCCTCTGCT GATGCTGATG 
    ATGCTAGGGG CGGCCTCCCA GTGGATCCTG GCCGCCGCCG CGGCGGCGGC 
    CGTGGCGGCG CTGCTGTGGC TGGCCGTGTC GACGCTGGAG TGGGCCTGGT 
    GGACGCCGCG GCGGCTGGAG CGCGCCCTCC GGGCGCAGGG CATCCGGGGC 
    AACCGGTACC GCCTCTTCAC CGGCGACGTG CCGGAGAACG TCCGGCTCAA 
    CCGGGAGGCC CGGAAGAAGC CGCTGCCGCT CGGCTGCCAC GACATCATCC 
    CGCGCGTGCT GCCGATGTTC AGCAAAGCCG TTGAGGAGCA CGGGAAACCA 
    TCATTCACTT GGTTTGGCCC AACGCCAAGA GTGATGATTT CAGACCCTGA 
    ATCAATAAGG GAAGTTATGT CTAATAAGTT TGGCCACTAT GGCAAACCAA 
    AGCCTACCCG TCTCGGAAAG TTGCTAGCCT CCGGAGTTGT AAGCTATGAA 
    GGCGAGAAAT GGGCAAAGCA CCGGAGAATT CTGAATCCTG CCTTTCACCA 
    CGAGAAAATA AAGCGGATGC TGCCAGTTTT TTCTAACTGC TGCACGGAAA 
    TGGTTACAAG ATGGGAGAAT TCAATGTCTA TTGAAGGAAT GTCAGAGGTA 
    GATGTTTGGC CTGAGTTCCA AAATCTTACA GGAGATGTCA TATCAAAGAC 
    AGCATTCGGT AGCAGCTATG AGGAAGGAAG GAGAATTTTT CAGCTGCAAG 
    CAGAGTCAGC CGAACGCATA ATACAAGCCT TTCGGACAAT TTTTATACCA 
    GGATATTGGT TCTTACCAAC TAAAAACAAC AGAAGGTTGA GAGAAATTGA 
    AAGAGAGGTC AGCAAACTTC TACGAGGAAT AATTGGAAAG AGAGAGCGGG 
    CTATTAAAAA TGGTGAAACC AGTAATGGTG ACTTGTTGGG CTTATTGGTG 
    GAGTCAAATA TGAGGGAGTC AAATGGGAAA GCAGAACTAG GAATGACTAC 
    GGACGAAATT ATTGAGGAAT GCAAGCTATT TTATTTTGCA GGAATGGAGA 
    CAACATCAGT ATTGCTCACT TGGACATTAA TTGTGCTAAG TATGCACCCA 
    GAGTGGCAAG AGCGAGCAAG AGAAGAAGTG CTACACCACT TTGGAAGAAC 
    CACACCAGAC TATGATAGCT TAAGTCGTCT GAAGATTGTA ACAATGATTC 
    TGTACGAGGT TCTTAGGTTG TATCCGCCAG TGGTGTTCTT GACCAGACGA 
    ACATACAAGG AAATGGAGCT CGGCGGCATC AAATATCCCG CTGAAGTGAC 
    CCTTATGTTG CCCATTTTAT TTATTCACCA TGATCCCGAT ATTTGGGGAA 
    AAGATGCAGG TGAATTCAAT CCAGGGAGGT TTGCTGATGG CATCTCCAAC 
    GCAACGAAGT ATCAGACCTC TTTCTTTCCA TTTGGATGGG GTCCCCGAAT 
    CTGCATCGGC CAGAACTTTG CACTATTGGA AGCCAAGATG GCTATCTGTA 
    CAATCCTTCA GCGGTTCTCC TTTGAGCTTT CACCATCGTA CATCCACGCA 
    CCATTCACTG TGATAACTCT CCACCCACAG CATGGTGCAC AAATTAAGCT 
    GAAGAAAATC TAACCATGCT GCTCACTTGC TCGGATTGGT CAAGGAGAAA 
    CAAGTCAGTT TGATAAGTTA TATATCTTTC TCTTTTGTAA ACAGAGGTAG 
    TCTACAGGTT TCGTATTCGA ACTAGAAAGA TTTTACTTAT TGATATACTA 
    GCTTTTATGC AGATAAAAAC ATGGTGAGTG AAATAATATT CCGAGTTTTT 
    AAT

    Gene models with high sequence identity

    1. AT3G14690.1 [+] show detail - cytochrome P450, family 72, subfamily A, polypeptide 15
      E-value: 7e-166; Score: 581.00

     

    InterPro Scan Digest

    Program Description E-value
    PatternScan Cytochrome P450, conserved site 0
    FPrintScan Cytochrome P450, E-class, group I 8e-20
    FPrintScan Cytochrome P450, E-class, group I 8e-20
    FPrintScan Cytochrome P450, E-class, group I 8e-20
    FPrintScan Cytochrome P450, E-class, group I 8e-20
    FPrintScan Cytochrome P450, E-class, group I 8e-20
    FPrintScan Cytochrome P450, E-class, group I 8e-20
    FPrintScan Cytochrome P450, C-terminal 2.6e-13
    FPrintScan Cytochrome P450, C-terminal 2.6e-13
    FPrintScan Cytochrome P450, C-terminal 2.6e-13
    FPrintScan Cytochrome P450, C-terminal 2.6e-13
    HMMPanther CYTOCHROME P450, SUBFAMILY 72 3.4e-244
    HMMPanther Cytochrome P450 3.4e-244
    Gene3D Cytochrome P450 3.7e-106
    superfamily Cytochrome P450 6.3e-112
    HMMPfam Cytochrome P450 1.8e-82

    See the detailed result >

    AT3G14690.1

    Model type
    Protein coding
    Short Description
    cytochrome P450, family 72, subfamily A, polypeptide 15
    Curator Summary
    putative cytochrome P450
    Computational Description
    "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR