K22430

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K22430

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K22430

Determination of introduced cDNA(s)

  • J013000O02 - Rice Full-length cDNAs - Original: J013000O02

    full reading [+] show sequence

    Nucleotide sequence: J013000O02 - full reading 
    GTCTCCTCTC CACGCCATTC CAGAACCAAC CCTCGCCGCC GCGTCGCTCC 
    TCTCCCCGCC GACGAATCCA GGCCCCCGGA TTCCCCCGCG CTATGGCCTT 
    CGCCAGCTCG CTCCTCCCGG CGCCGCCGGC CAGCGTCGCC CCGGAGCTCG 
    CCTCCTTCCT CCCGCCCCAG GCCAAGAGGG GCGCCGTCTC CCTCGCCGCC 
    ACGCGGCGCC GGGGAGCCCG GATTGGAGTT AGAGCCGAAG TGAATGAATC 
    TGGAAGTGCT TTGGCTGCTG ACGCCTTCGC CCAAGTCAAG CATGTTCTAC 
    TTCCTGTCAC CGACCGCAAC CCTTACCTCT CAGAGGGCAC TAGACAGGCT 
    GCAGCAACAT CCGCTTCTCT AGCAAAGAAG TATGGAGCAA ACATAACTGT 
    AGTTGTGATT GATGATAAGC CCAAGGAAGA GTTCCCAGAG CATGATACTC 
    AGATGTCAAG CATTAGATGG CATCTCTCAG AAGGTGGATT TACGGAGTTT 
    GGGTTGATGG AGCGCCTTGG GGAAGGGAAG AAACCGACGG CTATCATTGG 
    AGAAGTCGCG GATGAGTTGG AGTTAGACCT GGTTGTCCTA AGCATGGAAG 
    CAATACATTC CAAGCACGTT GATGGGAATT TGCTGGCTGA ATTCATCCCG 
    TGCCCCGTTT TACTGCTCCC GCTCTGAAAT GACCTTAGAG CTTTTCTTTC 
    ACCTGTCATG ACTTGAATGG AAGGCAAATA ATCTGTTTCA CCTCTTTCCA 
    GATGTAATTT CTACAGATGT CTTCTGGGTC ATTTTATGGA TGTACCTTCT 
    GAATGATTTT CTGTTGGATT CCATAATTTT GATTATGTGA ATATCAATAA 
    AAACATGTT

    Gene models with high sequence identity

    1. AT5G66090.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast, chloroplast s...
      E-value: 8e-53; Score: 204.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G66090.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR