K23613

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K23613

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K23613

Determination of introduced cDNA(s)

J033148A21 - Rice Full-length cDNAs - Original: J033148A21

full reading [+] show sequence

GATAGGACTC CATCTACTCA CATCAGCCAC GCGCGCGGAT AGCTCGCTCG 
CTAGCCGGGA GACATGGCGC CCGCGACACA AATGGCAGCT CCACCACCTC 
GCGGCGGCAG CTTCCGCGTC CTGCGCACCG CTCGCGTCGC ACCGTCGTCG 
CCCGACGGTG TCCCCTCGCT GCGCCAGCGT GCCGTCCCGC TCACCTTCCT 
GGACGCGATG TGGCTCCCGA CCCCGCCCGT CGACCGGGTC TTCCTCTACC 
GCCTCGGCGC CGCCGACGAC GACGTCGACG CCGTCCTGTC CCGGCTGGCT 
GACTCGCTGT CCCGGGTGCT CCACGTCTTC TACCCGCTCG CCGGCCGCCT 
CCGCCTCACT CCCGGCAAGA CCAACCGGTA CGAGCTCTTC TACCAGCCAG 
GCGACGCCGT CGCCTTCACC GTCGCCGAGC ACGACGACGG CGTCGGTGTC 
GACGAGCTGG CCGCGGACGA CCCGAGGGAG GTCGCCAAGA TCGCCCCGCT 
CGCGCCGGAG CTCCCGGATG GCGGCGCGGT GCTGGCCGTG CAGGCTACCG 
TGCTGCCCCC CGCGCGCCGC GGCCTCGCCC TCGGCGTCAC CGTGCACCAC 
GCCGCCTGCG ACGGCTCGAG CTCCACGCAC TTCCTCCATA CCTGGGCCGC 
CGCCTGCGCC GGCGCTGTGG TGCTGCCGAA GCCGCCCGTC ATCGACCGCA 
CGTTCATCCG CGAACGTGAG GACCTCTACG ACATCATGGT CAATCGAACG 
AAGGAGGAGT CTGACAAGTT CAGCTCGCCC GACGTCGCCG ACAACAAGCT 
CCTCGCCACT TTCACGCTGT CAGGAGAGAT CCTTCAGAAC ATCAAGGATA 
TAGTCGCCGC CCCCTCGGTG CACGTCCATC GTCGCGACGT TCGCCGTCAT 
ATGGCAGTGC CACATCCACG CCGCACTAGC AAGCGACGTC GAAGCAGAGA 
ACAACCCTCG AAACCATGGC CGTGCCCACT TCGTCTTCCC CACCGATCAC 
CGGGCGCGGA TGGAACCCCG CGTCCCCGAC AAGTACCTCG GCAACTGCGT 
CGGGCCATGC TTCGCCTCGG CGCCCAAGAA AGAGATCGCC GCCGCCGACG 
CGGAGGACGG CCTCTTCACG ACCTGCGCCG CGATCGCCGC CGCCATCGAC 
GAAGGAACGA GATACGATCC CGGCTACTGG GAGAGGTGCA GGGAGCACGT 
CAGAGGGATG AGCACGAGCG ACGGCCCGCC GCTAGCGGTG GCCGGGTCGC 
CGAGGTTCCG CGTGTACGAC GTGGACTTTG GGTTCGGGAG GCCGACGAAG 
GTGGACGTCG TGTCCGTGGC GAAGACCGGG GCGATCTCGG TGGCGGAGGG 
CCGCGGCGGC GGCATTGAGG TGGGCGTCGG TTTGCCGCCG GAGCGGATGG 
AGAGGTTCCG GAGGTGCTTC ACTGATGCCG TCACGTGGCT ATCGTCGCCA 
TCGTCCAGTG ACACGTGACA CGTGGCGCGC GGCAGGCAGG CAGGCAGGCA 
CGTGTCGCTT GGCTTTCGTG GGCTTCGATG GGCTGCTTCC GTCAGCTATC 
ACGTGCGTGC CCTATGTGAG CCGTCGGATG GCTTGGACGA TTGATAAGTG 
CTGAAGGCAC GCTATATGCA CATGCACCCC GGACGCTTTG CTCTTTTTTT 
TTTTAAGAGA ATACCGTAGT ATTGTATCGA CGTATCCGTA TCCCAATATC 
CATCCCTATT TAAAACATAT ATGGATTTTT CTCATCGTCG CAGATAAATT 
TGTAATGAAA AAAACAAATT AAACTACAGC TAGTTTAATC

Gene models with high sequence identity

AT5G39050.1 [+] show detail - HXXXD-type acyl-transferase family protein
E-value: 1e-39; Score: 70.90

InterPro Scan Digest

Program	Description	E-value
Gene3D	no description	8.9e-35
Gene3D	no description	1.2e-27
HMMPfam	Transferase	2.3e-20
HMMPfam	Transferase	3.2e-18

See the detailed result >

AT5G39050.1

Model type: Protein coding
Short Description: HXXXD-type acyl-transferase family protein
Computational Description: HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G39080.1); Has 1994 Blast hits to 1978 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 30; Plants - 1963; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR