K23839

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K23839

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K23839

Determination of introduced cDNA(s)

  • J013010N16 - Rice Full-length cDNAs - Original: J013010N16

    full reading [+] show sequence

    Nucleotide sequence: J013010N16 - full reading 
    GGCAGAGCAC CGTCCACTCT TCCTCCGACC AACGCGCTCG CCTCGCGTCA 
    TCGGCTCAAA TGGTGGAGGC GGCCACGCGC GGAACCGAGA GCCCCTCCTC 
    CTGCTAATGC GCCGCCATGG CCGCCCGCGC GCTGGGTCCA CCTCCTCTTC 
    ACGCTCTCGC AGCCACGCGG CAGGCTCCTC GCTGCCCCCC GGCTGCCGCC 
    GCGCCGCCGA CCCATGGCTA CCGGCGTGGA GCCGCGGTGC TCTCCGGCCG 
    CCGGGGAAGG CATACTTTGA GTTCAATACA ATTGATGCAT GCTGTTAGAG 
    GTGGCAATCT TCAAGTGGAA CCAAACATGC TTCATTCCCC CAAGCCATTG 
    ATGTCCACCA GACGTGGGTG TGTGGCTAGT CCTACTATTG CTAATGTGGA 
    TGACTGCACT GAAGGTGAAG GTGCACTGGG GTACACAATG ACCCAAATCT 
    GTGATAAGTT TATTGAGTTC TTCATGTACA AGAAACCACA AACAAAGGAC 
    TGGAGAAAAG TATTGGTGTT TAGAGAGGAG TGGGAAAGAT ACAGACCATA 
    CTTTTACAAG CACTGTCAAG CACGTATAGA TATGGAAAAT GATTCTTCAA 
    TGAAGCAAAA GTTGGTTGTA CTTGCTAGAA AAGTTAAGAA GATTGACAAT 
    GAGATAGAGA AGCACATGGA ACTCTTCACA CAGCTCCGCG AGAATCCCAC 
    AGATATTAAT GCCATTGTCG CAAGAAGACG AAAGGATTTC ACTGGAGGGT 
    TCTTCCAACA TCTTAATTTT CTTGTTAATG CATATAATGG TCTTGATGAG 
    AGAGATGCAA TTGCCAGGCT TGGGGCGAAG TGCCTGTCTG CAATCCATGC 
    ATGACTGCAC ACTGGAGCAG TTGGACCTTG ATTCTGCTCA ATCAAAGTTT 
    GATGACATTC TGAATTCTTC TTCCCTGGAT GATGCATGTG ACAAGATTAA 
    AAGCTTAGCC AAGACTAAAG AACTTGATTC GTCCTTAATT CTTCTAATAA 
    ACAGAGCGTG GGCTGCTGCA AAAGACTCTA CAACTATGAA GAATGAGGTT 
    AAAGATATAA TGTGTCATAT CTATACAACA ACTAAGGAAA GTCTCAAGAG 
    CATCTCGCCT CCAGAGATGA AGCTTCTGAA GTACCTATTG AATATTGAAG 
    ATCCTGAAGA GCGGTTTGGT GCTCTTGCAA CAGCCTTTTC TCCAGAAGTC 
    GAGCATGAAG CCAAGGATGA AGATGCTCTG TACACAACTC CCAACGAACT 
    CCACAAATGG ACCAAAATGA TGCTTGATTC GTACCATCTC AATAAGGAGG 
    AGACGGATTT TATGGATGCC AGAAAGATGA GTGACCCAGT GATCATACAG 
    AGGTTAACTT TGCTTAAAGA GACAATCGAA GAAGAATACA TGAAGAAGTA 
    TATACATCCA GAGGAGCAAG AATCTGAGGA CGACGAAGAT TCAGAAGAGT 
    GAGCTTGCAA GTGTATTTTT ATAGTTGTAG TCTTGATGCA GAGATGATAT 
    TTTTATAGTT GTAGTCTTGA TGCAGAGACG GTATTTTTCT AGTTGTAGTT 
    ACTGCAGATT GGTAGTGCCC TGCTGCTTTT TGCAAAGATG GACTTCAATC 
    TGCTTTGCTT CCCTCCTGTT GGACGAAAGA AAATGCCAGT GGTGCAGTAA 
    TTGTAAAGTG TATCATGATC ATCCCAAAGC CTGCGTATCA TAAAATTCCC 
    TAAGATTGGT GGGGTTCCTT TTTCCCTGTT TTTCCAAATT GTTCTCTCCT 
    CTTGATTTTA TGATTGTGAG TCACAAAGAT GTTGCCG

    Gene models with high sequence identity

    1. AT4G37920.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 2e-116; Score: 179.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G37920.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36320.1); Has 123 Blast hits to 120 proteins in 40 species: Archae - 2; Bacteria - 11; Metazoa - 8; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR