K24305

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K24305

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased size (PATO:0000587)
    (Seed::Shape::small)
  • decreased length (PATO:0000574)
    (Seed::Shape::short)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K24305

Determination of introduced cDNA(s)

  • J033071E07 - Rice Full-length cDNAs - Original: J033071E07

    full reading [+] show sequence

    Nucleotide sequence: J033071E07 - full reading 
    GCCTGCTGAA GCGGAACTGA AGAAGAAGAA CCACCGCCGT GGAGACGTAG 
    GCGCAGCGCT CCCGATTCCG CCGCCGCCGT CGCCGTAGCC GTCGCCGCCG 
    CTGCCGCGCC GCGGTGTCGA CGAAGGAGCC CTCCGCTTGC GGCCGCTTGG 
    GTGGTCGGAT CTAACATCTA GGGGGTGAGC AAATCAACCA GGAGATGGAA 
    ACCATCCAGG CGCTAGAATT GGGAGTTGAA CAGAAAAAGT CAGAACCAGA 
    GGTTGATGAG ATGCCAGGAT CCATGGAGGA TCAAAAGCCT GCGGAAATAA 
    GCCAGGACAA AGTCGCGGAA ACTGATATTA AACCAGCAGT ACAAACTGAG 
    CTGGAGACAA GTCCAGTGGC TAATCCAAAC CCTGCAGAAA CAAACCAGTA 
    CACAGATGGG GTAACTTATG GTGACCTAGA AACCACTGAT CCAGGCACTA 
    CTTACCGCTG CAAAAGATGT CGCACACTCG TCGCTACTGA AGGCTATGTT 
    GTTACCCACA AAGTTGGTCG TGGTGAGAAG TGCTTCGCGA CGCGCAAAAA 
    GTATCATGTG GATGAGAAGG AACCCGAATG TACCTGCCTC TTTGTGGAGC 
    CCTTGAAGTG GATGCAACCT GTGGTGGAAG GATATATTTC AGGGAAGATC 
    GCGTGCAGGA AATGCAACAG CCGATTGGGA CAATTCCACT GGGCAGGAAT 
    GCAGTGCAGC TGCGGAGCCT GGGTGAATCC AGCTTTCCAG CTGGTCAAGA 
    GCAAGATTGA TCAGTGTGAG ATGTGATCAG TCGGGTGACT CAACTTCAAC 
    TTCATTATCA GTGACATCGC AATCATACCC AGCTGTAGGA AACATTATTA 
    TTTCCTTCTG AAGCTTCTAT AGGCACTCTG GTAGTAAGTT TTGCTGTCTA 
    CTAAATGTAA GTCTTTGCAG TCCGCACCAT TCAGATTCAG TGTTTCCTTA 
    GTTGCATCAT CTTGATGAAA ATAATGGGAA CATATCAGG

    Gene models with high sequence identity

    1. AT4G18593.1 [+] show detail - dual specificity protein phosphatase-related
      E-value: 6e-34; Score: 141.00

     

    InterPro Scan Digest

    Program Description E-value
    Coil coiled-coil 0
    HMMPanther gb def: Hypothetical protein 6.8e-19
    HMMPanther DUAL SPECIFICITY PROTEIN PHOSPHATASE 6.8e-19

    See the detailed result >

    AT4G18593.1

    Model type
    Protein coding
    Short Description
    dual specificity protein phosphatase-related
    Computational Description
    dual specificity protein phosphatase-related; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR