K25134

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K25134

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K25134

Determination of introduced cDNA(s)

  • J033103D19 - Rice Full-length cDNAs - Original: J033103D19

    full reading [+] show sequence

    Nucleotide sequence: J033103D19 - full reading 
    GGCGTAGTAG TAGTAGTAGT ATTAGTCTAT TCGAGTCCTA CCAGTAGCTA 
    GCTAAGCAGC CGAGACGGTG GCGGTGGAGG AGGTGGTGGT GGTGGTAGTA 
    GTAGTACGCC GGGGAGAGAG AGCCGTTGCT GCTGCTGTGA GGTGAGGGCG 
    AGATCTAGGA GGGAGGCGTC CATGGGAGCT CGCTGCTCCA AGCTCTCCGT 
    GTGCTGGTGG CCGCCGCACT TCAAGTCGCC GCTGCTTGAG AATGGCGCCG 
    CCGCGGACGA CGGCAGCGGC GTGCCGGTGT TCGCCGAGTA CAGCCTCGAC 
    GAGCTACGGG TGGCGACCGA CGGGTTCTCT CCCGAGCGCA TCGTGTCGGA 
    GCACGGCGAG AAGGCGCCCA ACGTCGTCTA CCGCGGCACC CTCTTCAGCA 
    CCGGCCGCAC CGTGGCCATC AAGCGCTTCG GCCGCTCTGC CTGGCCCGAC 
    TCCCGCCAGT TCTTGGAGGA GGCGAGGGCT GTCGGGCAGC TGCGGAGTGT 
    CCGGCTGGCC AACCTGATCG GCTGCTGCTG CGAGAATGGC GAGCGGCTGC 
    TCGTCGCGGA GTTCATGCCG CACGAGACCT TGGCAAAGCA TCTCTTCCAC 
    TGGGAGACAA AGCCATTGAG CTGGGCAATG AGGGTACGAG CTGCATTCTA 
    TGTGGCTCAG GCATTGGAGT ACTGCAGTAG CAAAGGGAGA GCTCTCTACC 
    ATGATCTGCA TGCATACAGG GTTCTCTTTG ATGTGGATGG TAACCCCAGA 
    CTGTCGTGCT TCGGTCTGAT GAAGAACAGC AGGGATGGGA AGAGCTATAG 
    TACCAATTTG GCTTTCACGC CTCCTGAGTA CCTTAAGACT GGCAGAGTAA 
    TTCCAGAGAG TGTGGTGTAC AGTTTTGGTA CTATCTTGCT TGATCTCCTA 
    AGTGGAAAAC ATATCCCACC AAGCCATGCG CTTGACCTTA TAAGAGGAAA 
    AAATTACCTG GTGTTGATGG ACTCTTGCTT AGAAGGCCAT GTCTCCAGCT 
    CTGATGGAAC TGAGTTGATA CGATTAGCAT CCCGTTGCTT GCAGTATGAA 
    GGTCGTGACC GGCCAAACCT GAAATCGGTG GTGTCTGCTC TTGGAAACCT 
    CCAGAAAGAT GCTTCTGCTC CTTCACATGC TTTACTAGGC ATACAACATG 
    ATAAGGAAAA TACAGAGCGA ATTTCGTTAT CTGCTATAGC GAAAGTTTAT 
    GCCAGAGCAG ACCTTGATGA GGTTCATGAG ATGCTGGAGA ATGATGGATA 
    TTGTGAGGAT GAAAGAGCAA CATTCGAGGT ATCTTTCCAT TCCTGGACTG 
    GCCAACAAGT ATCTGATAGT ATTCTTGTCA AGAAACATGG AGACAGTGCT 
    TTTCAATCCA AGGATTTTGC GACTGCAGTT GAGTGCTACT CAAGGTTCAT 
    TGACACTGGT GTAATGGTGT CTCCGACTAT GCTGGCACGA CGAAGTTTCG 
    TATACATGGT GCTCGGCAAG CTGCAAGAAG GCCTTGCGGA TGCAAAGAAA 
    GCAGCAGACA TATCTCCTGA GTGGCCTACT GCACACTACC TTCAAGGGAT 
    GGCATATCTC GCCATGGGAA TGGAGCCTGA AGGGCATGAA GAACTCAAGC 
    AAGGCGCCGC TTTGGAAGCT GAAAGGAATG CTAGATAGAG ATGAACTGTA 
    TAGCCCTCAA ACATGATGTG ATGCCTCCTC TCTTCTGTAC CTAGATCGCC 
    TGCATTTTGG GTGTCCTCCA GTGCTTTGCC ACCAATAGGG CTGTTTTTTG 
    GTCTTCCCTA ACTTGTATTG GTATTTCCAG TGGTTTTACA ACTCCTAGGT 
    TGGCTGTTAT GACACCTCCA ATATATTCAT AAGTACAAAA AATGGGCAAC 
    TAGC

    Gene models with high sequence identity

    1. AT5G59010.1 [+] show detail - Protein kinase protein with tetratricopeptide repeat domain
      E-value: 0; Score: 636.00

     

    InterPro Scan Digest

    Program Description E-value
    ProfileScan Protein kinase, catalytic domain 20.16
    ProfileScan Tetratricopeptide repeat-containing 8.991
    superfamily Protein kinase-like domain 8.5e-44
    superfamily TPR-like 1.2e-13
    Gene3D no description 5e-12
    Gene3D no description 2.5e-22
    Gene3D Tetratricopeptide-like helical 1.3e-14
    HMMSmart Serine/threonine-protein kinase domain 3.9e-08
    HMMSmart Tyrosine-protein kinase, catalytic domain 7.5e-08
    HMMPanther PROTEIN KINASE-LIKE PROTEIN 4.9e-281
    HMMPanther SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE 4.9e-281
    HMMPfam Serine-threonine/tyrosine-protein kinase 5.8e-25

    See the detailed result >

    AT5G59010.1

    Model type
    Protein coding
    Short Description
    Protein kinase protein with tetratricopeptide repeat domain
    Computational Description
    Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT3G54030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR