K25223

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K25223

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K25223

Determination of introduced cDNA(s)

J033097M05 - Rice Full-length cDNAs - Original: J033097M05

full reading [+] show sequence

GAGATGCCAA GCATGCGAGT CACCACTGAC ACCTGGCCCC GCCGCGCCGC 
CCAAGAACCT CTCCTTCTTC TCCTCCTCCG GTCCTCCCTG ATGAAAAGCG 
CGTCACTGCA AGCACTGAAC CCAAACCGAG CCATGGCGGC CATGGGGCGA 
TCTGTGCGGG TGGTGCTGGA CTCCTCCGTC CTCCTCGACC CATCCGGTGT 
TACAGCGGAG GAGGAGGAGG TGGTGGTGGC GCTGCGGCCT GGGGCGGAGG 
CGCTGCTGCG GCGCCTGCGA TACTCCAATC TCCGGGTGGC AATTTGCCAT 
CCGGAGGGCT TGCCAACTAA TGAGTCAGGT TTTCTTGAGA AGACTGCAAA 
ATTGTACTCC TTTGGATATA TGCCACTTAC ATCTCCAAGT GGGAGCAATT 
TACTAAATGA GTTGATGTTA GAATGGAGTG GAACGAATTT TTGCTTCTAT 
GTGACTTCAG GAGTTCATGA AGGTCTACTA TCTGAACTTC AGAATCACAA 
CTGGGAAGTT ATTGCCATGG GTAATGAAGA TGTCATAAAG AACTCTGGAG 
TTATACATAT TAGCATGCTT CAAGAGTTAC TTATCACTTT GGCAACTTCA 
ATAAAAAAGG AAATAGGAAA CTCATCTGCT TTCGTGGTTG GCTATGTTAT 
GAAACAATCC CGTGAGGAAG ACTTTGCCAA GAGAGGAGCA TTCCCCATTT 
ATCCTAGTAA AAACGATCTT ATCTTTGTTC CACTCTCTTT TGAACTTCCC 
TTAGCTTCTC AATTGCAAGA AGTTGATCTA GTGCTACACA AAATAACTGA 
TGAGATCATC AACATTGATC CAAACTCTTC CATCAGTTTT CCGAAGGGGA 
TTTCATTTTC TCCGGGAATG TCTGAAATTA TAAGGTTTGT AGAAGAGCAC 
TGTGATTTTT GTGTAATTGA TCCATTCAAA AATATTTATC CATTGCTGGA 
TCGCATCCAA ATTCAAGAAA TTCTAATCCG ACTGGAAGGA CTTAGCGCCG 
AAGGAAGGCC AAAACTCCGA GCACCATGCT TTTTAAAGAT TGAAAGCTTT 
TGTGGCAGTG AATTACAGAA ACAACTAGCA GAAGCTAAGT TATCCTTTCC 
GCTCATTGTG AAGCCACAAG TAGCATGTGG AGTTGCTGAT GCCCACAATA 
TGGCATTGAT TTTCAAAATC GAAGAATTTA GCAACCTTAG TGTGCCTCTT 
CCAGCTATTC TACAGGAATA TATTGACCAT GGATCCAAAA TATTCAAATT 
TTATGCAATT GGAGACAAGA TTTTTCATGC TATTAAGAAC TCAATGCCCA 
ATGCAAGTCA TCTTAAATCA TCATCAGGAG GCAAACCTCT TACATTCAAC 
AGTTTGAAGA CTCTTCCAGT GGCTACAAAG GAGCAGCTGC TGCAAAACGA 
GGTGCAAGAT AGCAAATTGT TGGACATTAA TCTAGTAGAA GAGGCTGCAA 
AATTGCTGAA GGAATTGCTA GGGCTTACAA TATTTGGGTT TGATGTCGTT 
GTTCAAGAGT CCAGTGGAGA CCATGTCATA GTGGACCTAA ACTATCTTCC 
GTCTTTCAAA GAAGTTCCTG ACAATGTGGC GATGCCTGCA TTCTGGGATG 
CAATCAAGCA GTCATATGAG TCAAGGAAGC AGATGACACA AACTTAGTTC 
AAGTTCTCAA GCAAATGATT TGCATACAGG CGACAACATT CATACTAATT 
GGAAAGGGAG ACCGCTCTTT GGGATCGAAT TAACTCTGAC CTCTAGCAGA 
GGTTGCTTGT CACTTAGATT TGTGGAACTG CTTGCGATGA ACATTGCTGG 
CAGAGATGTA CACCTAGCGC TAATAATTTG GGGAACAAAG TCTTTTGTGT 
TCCCTGAGTT AAAACCCTTA GCAGAATAAG CATGCAGAAG CAACTCTCCC 
GTGTTAAACT AATTATTCTG TTGTGCAGTG TACCATTTAC ATGTGAATTT 
TGGCCACTCT GTAAACACTC TGCTGAAATG AGAAATTGCT TACTGATATG 
C

Gene models with high sequence identity

AT2G43980.1 [+] show detail - inositol 1,3,4-trisphosphate 5/6-kinase 4
E-value: 5e-117; Score: 419.00

InterPro Scan Digest

Program	Description	E-value
HMMPIR	Inositol-tetrakisphosphate 1-kinase, uncharacterised-N-terminal	0
HMMPfam	Inositol 1, 3, 4-trisphosphate 56-kinase	4.2e-43

See the detailed result >

AT2G43980.1

Model type: Protein coding
Short Description: inositol 1,3,4-trisphosphate 5/6-kinase 4
Computational Description: "inositol 1,3,4-trisphosphate 5/6-kinase 4" (ITPK4); FUNCTIONS IN: magnesium ion binding, inositol-1,3,4-trisphosphate 5/6-kinase activity, catalytic activity, ATP binding, inositol tetrakisphosphate 1-kinase activity; INVOLVED IN: inositol trisphosphate metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol-tetrakisphosphate 1-kinase, uncharacterised-N-terminal (InterPro:IPR017418), Inositol 1, 3, 4-trisphosphate 56-kinase (InterPro:IPR008656); BEST Arabidopsis thaliana protein match is: Inositol 1,3,4-trisphosphate 5/6-kinase family protein (TAIR:AT4G08170.2); Has 388 Blast hits to 384 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 95; Fungi - 0; Plants - 245; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).
Link: InterPro Scan - TAIR