K27045

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K27045

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K27045

Determination of introduced cDNA(s)

  • J023036B16 - Rice Full-length cDNAs - Original: J023036B16

    full reading [+] show sequence

    Nucleotide sequence: J023036B16 - full reading 
    GGGAGCCAGC GAGCACTCGA GCTGAGAGCA AAGAAGCGCA TCCTTCTCAT 
    GGCGGCCTCC TCGTCGTCGG CGGCGGCGGC GGCGTTGTCG CCGGCGATCT 
    CTCTTCACCT GCTCCGGCCG CTCCCGTGCA GAGCCGTACT CCTGTCCAGG 
    CAACGGAGGC CATTTCCATC GCCAAGAGCT GGCTGCCTGG CGGCGGTAAG 
    AGCTCAGCGG CGGTGGCTCC GGTCGCCGGA GATCGGCCGG TGGAGGAGGC 
    GCGGGGGCTA CGCCTGCCTC TCCTTCAACT CCGGCAATAA GCCGCCTCCG 
    CCTTCCAGTG AGAATTCAGA CGAATGGCCA ATCCTTCGCC GATGGGATGT 
    GCCGTGGGAG TGGCAGACGG TGGTGCTCAC CATGGTGGGC TGTGGAGTAA 
    GACAGCTTTG TTCTGACAGG ATTGGTTGAG CAATCGGTTT TGACGTATGT 
    GGGGTTTAGA GCTGTCGAGG CAACGGTAGA TCAGAAGGCA GAAATACTTT 
    TCCTTGGACA ACTTAGCGTG ACAGCAGTTG TGCTGGGTGT TGTATATGGC 
    ATCACCAATA CCTTCCGACC ACTGCCAGAT GATATATTTC GTTATGATAT 
    TAAAGAACCA TTCAAGCTTC AAAATGGCTG GCTTCTGTGG GCTGGAGTTG 
    GTCTCTTTGG CGCTATAATT TCTATTGCTT TAGTTGGGGT TGCTATGACT 
    TATCTGAATG GTGAACCTCC AGAAAGAGAG GTCAGGCCTT TTACATACTG 
    TACTATATAG ATTTTTCTCA GGCCATACAA TTTTATTCCC ATTTAATTAA 
    TTATTACCCC TCAATCTTTA GTTTTTAACT CACATTGTTT TAATCCCATT 
    CATCATTAAC CTCTAATTCA ATTTGTTCAG CAAGAAAAAA AACACATCTT 
    GGACCGCTTA ATATTCATTA AACAATAACC TATAACAATA TGCCAAATGG 
    AGCAATTCAT GCAATTTGTA ATAGACCATT GTCTTTGATT ACCCAACCCT 
    TTTGGCTTGC CTTGCATGAC CCTAGGTCTT ATCTAATCAC AATCTTCTCA 
    TGTATGGACT GGATTAAGCT GATTGTGATT AAACAATGAC AACTCAAGGC 
    TATCATATGG TCACTTGTGC AAGATTCAGA TGGTAGGGAA GCCAGAAAGA 
    TAGGTTTTCC ATGAGTAGCA TAGGAATTAG CAAATATGCC TATTCTCTTT 
    GGTTTGAGAT GAGACAGCAT AATTAGGAAC AGTTTGCGGC ATAATTAAGA 
    TGGAATGCAC CCTTTGATAA AGTGAAGCTT CATACACAAG GTTTATTCAA 
    TGCTTTGACT GACAAGCTTA TGTGGTAAGG CCTCACTTTA CATTGATAGG 
    GGCTTACGCT TTTCCAAATT GAATCTCAAC ATGTTTTGTG TACTTACCTC 
    CTGTTATACT GATTACCTTT TTTCAGTGTG CTGTTTCTTG AGTCCTGATT 
    GCTGATCTAT TTCTCTGGGC TTTTTTTTTC AGACTGACTC GTTAGTTCTT 
    TTATTGCCAT TAATCGGCTC ATCAAGTGCC AGCACTGCTT TTCTGGTGGG 
    CATTACTGGA GTTCTAGCAC CAATTCTGGA GGAGACTGTG TTTCGAGGAT 
    TTTTAATGGT GTCCTTGACT AAGTGGTTTC CTACTCCAGT TTGCATACTT 
    GTCAGTGCTG CTCTATTTGC CTTTGCTCAT CTGACACCTG GACAATTCCC 
    ACAGTTGTTT ATACTTGGTG TTGCGTTGGG TTTTTCATAT GCTCAAACCC 
    ATAATCTTCT AACTCCTATC ACAATACATG CATTTTGGAA CTCGGGAGTA 
    ATATTACTGT TAACCTTTCT TCAGCTGCAA GGGTATGATA TCAAGGAGCT 
    TTTGGGAGCA TCTTGAAGGC TTTGACTGAT CAGCCTACGG CTTTGTGCAT 
    ATGCTTTAGT AACTTGATCA AAGATACTTG AAAAGAACAA TGGGTTCTCC 
    TTTATTTTAC TGTTCTCTGT AATTTCATGT TTCCCGTAAC TCCCAGAAGT 
    AAATTACGAG CGAAATATAT TGTGTTTGTA CTC

    Gene models with high sequence identity

    1. AT1G14270.4 [+] show detail - CAAX amino terminal protease family protein
      E-value: 8e-50; Score: 195.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G14270.4

    Model type
    Protein coding
    Short Description
    CAAX amino terminal protease family protein
    Computational Description
    CAAX amino terminal protease family protein; INVOLVED IN: proteolysis; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); BEST Arabidopsis thaliana protein match is: CAAX amino terminal protease family protein (TAIR:AT5G60750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR