K27435

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K27435

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K27435

Determination of introduced cDNA(s)

J023002H17 - Rice Full-length cDNAs - Original: J023002H17

full reading [+] show sequence

GAGCGAGACC GCGTGCGCGG AGGCCGGAGG GGGAGAGGAC GAGAGGCGGC 
GGGCGGCGGA GTAGATGGCC GGCGGTGGCG CCGCCGCGTC GGCGCTCTCG 
ACCCCATGGA GGTCGCTGCT GCAGCGAGCG TTGGACGGCA ATGCCCACTT 
GAAGCACTCC ACCTTCTTCC AACTCGCCAC GGTGGGTGGC GGCGGCAGGC 
CGGCGAATCG CACCGTCGTA TTCAGGGGGT TCCAGGAGCA ATCTGATAAG 
ATTCAGATTA ATACGGATGC ACGAAGCAAT AAGATTGGTG AGATCAGGAA 
TTGCTCCTTT GGTGAGATAT GTTGGTACTT TACTGACACT TGGGAACAAT 
TCCGTATCAG CGGATTCATA GATGTGATTG ATGGTTCAAA CCCCGAACCT 
GTCAAGCTAC AGCTGAGAGA GAGAGCTTGG TTTGGAAGCT CAGTAAAATC 
GAGATTGCAG TACTTGGGAC CATGCCCAGG TCTTCCTATT CCGGATGATG 
ATCTCATTAA GGATGCTCAT CTTGATCCAT CAGCTGGTCC AGTAGATGCC 
TTTTGCCTTC TGGTTCTTGA TCCAGAAAAG GTCGATTATT TGAACTTGAA 
AAGCAATCAA AGGTTAATGT TCACAAGAAA CCAGAAGGGA GATGGGACCA 
ACAGTTGGAT GGCCGAAAAA ATTAGCCCAT GACTGTTTGC GGATTCTATT 
GCAGCTCCAA ATTTGTTTGT GGATTTATCA TGGTCTACTA GTACCTCTCT 
TTTCCGAGCA AACTTTAGGG GAACTGTGAT GTGCACTAGG GTTCCCGATC 
TTCCAAAAGG TTCTGATAAA CAACGATTTG GGCGGAGTCA CGACACAAAT 
CGATCCGGCT TCTTGAACGC GCACGCTCTT GAGCCCCGCA ATCGCAGCAC 
CACGTCTATC CGAGTTAGTG ATGTCCGCAT CAAACTGCAT ATGTTATTCG 
TTAACAGAGG GAGGAAAAAG AGTCAATACA GTACAAATAA ATCAGAGATT 
AATGGACAGT GCAAATAAAT ACTACTACTA TAACTCTTGC CTGTACATAG 
TCATTTTTTC TTGTTTCTCT TGATATTTTA TGTATTCCAG TTTCCTTACA 
GGAATGTTAA TGCCATACCA TGGATGTTGT CCTGGCC

Gene models with high sequence identity

AT2G46580.1 [+] show detail - Pyridoxamine 5'-phosphate oxidase family protein
E-value: 1e-66; Score: 250.00

InterPro Scan Digest

Program	Description	E-value
superfamily	FMN-binding split barrel, related	2.3e-30
Gene3D	FMN-binding split barrel	1.3000006720273e-08
HMMPfam	Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain	0.00045

See the detailed result >

AT2G46580.1

Model type: Protein coding
Short Description: Pyridoxamine 5'-phosphate oxidase family protein
Computational Description: Pyridoxamine 5'-phosphate oxidase family protein; FUNCTIONS IN: FMN binding, pyridoxamine-phosphate oxidase activity; INVOLVED IN: oxidation reduction, pyridoxine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxamine 5'-phosphate oxidase (InterPro:IPR000659), FMN-binding split barrel (InterPro:IPR012349), Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain (InterPro:IPR011576), FMN-binding split barrel, related (InterPro:IPR009002); Has 1290 Blast hits to 1290 proteins in 309 species: Archae - 0; Bacteria - 510; Metazoa - 56; Fungi - 60; Plants - 40; Viruses - 0; Other Eukaryotes - 624 (source: NCBI BLink).
Link: InterPro Scan - TAIR