K27913

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K27913

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K27913

Determination of introduced cDNA(s)

  • J023004B14 - Rice Full-length cDNAs - Original: J023004B14

    full reading [+] show sequence

    Nucleotide sequence: J023004B14 - full reading 
    GTCCTCCATC TCCTCGAGAT CGACATGCCA CGCTCACGAG TTCTTCTTGA 
    GTGGATCAAT GGAGATGTGT TGCTGCTGAG CTGAGCAGAG TGTGTGTAGA 
    ATGATGGGAG CCCTGCAGCA GCAGAGCAAT GGCCATGGCC ATGGCGTCCT 
    CCTCCTCGCT GAGGCTGGCT ATGCCGAGGT TGATCCCACT GGAAGATATG 
    GCAGATTCAA TGAGATTCTT GGCAAGGGAT CGTCAAAGAT TGTGTATAGG 
    GGGTTCGATG AGTGGAGGGG AGTGGAGGTG GCGTGGAACC AGGTGCGGCT 
    GCGCGACGTC GTGCGGGGCG GCGGCGAGCT GGAGCGGTTC TACGGCGAGG 
    TCCACCTCCT CGCCGCGCTC CGCCACCGCG GCATCGTGCG CCTCCACGCC 
    TACTGGGTGG ACGCGCCGCG CCGCGCCCTC AACTTCGTCA CCGAGCTCTT 
    CGTCTCCGGC ACGCTCCGCC AGTACAGGGA GAGGCACCGG CGGGTGAGCG 
    CGGCGGCGGT GCGGCGCTGG TGCGCGCAGA TCCTCGACGG CCTCGCCTAC 
    CTCCACGCCC ACTCGCCGCC CATCATCCAT CGCGACCTCA AGTGCGACAA 
    CATCTTCGTC AACGGCAACC AGGGCGAGGT CAAGATCGGC GACCTCGGCC 
    TCGCCGCGTT CCGCCGCGGC GGCGGCCACG CCCGCTGCGT CGGCACGCCG 
    GAGTTCATGG CTCCCGAGGT GTACGACGAG TCCTACGACG AGCTCGCCGA 
    CGTCTACTCC TTCGGCATGT GCGTCCTCGA GATGGTCACC CTCGATTACC 
    CCTACAGCGA GTGCTCCAAT CCCATCCAAA TCTACAAGCG AGTCATCTCC 
    GTATGATCTG ATCACCACAG AATTTCTCGT GAATTCTTGG ACACGATTTG 
    ATCAAGAGAA TGCGTGTTTC TGATCAGGGG ATCAAGCCCG CGGCGTTGTA 
    CAGGGTGAGC GACCCGGTGG TGAGGCAATT CATCGAACGG TGCCTCGCCC 
    CGGCGGCGCG GCGGCCGGCG GCGAGGGAGC TGCTCGACGA CCCGTTCCTG 
    CTGCCGCTTG AGGATGATGG CTTCTTCTCC GGCGACGGCG GCGATGGACA 
    TGGCGGTTTT GGCGTTGGCT ACTACAATCT GATGTACAAC TACCTGCACC 
    AGCCTGCTTG CATCGACGAC CACCATGCCT GCAGCAATGG CGGCTTGTCG 
    CCGTCGAATA GCGTCGGCGA CAACGACGTG GACGCGGCCG TGCAGCGGGG 
    GGACGACGAC GGTGACAACT GGCTCCGCGA CATCCACATG CTGTTCGACG 
    AGGACGACGA CGACGCCGCC GCCGCCGACG CCAACGAGCG TGTCGGTGGC 
    GTGGACATCA CCATCAAGGG GAGGAGGACG GACGACGGCG GCGTCTACCT 
    CGGCCTGCGC ATCGCCGACA AGAACGGCAC AGGGCGTGGC CGGATAATCT 
    GCTTCCGGTT CGACACCGAG GCCGACACGG CGATGACCGT GGCGGCGGAG 
    ATGGTCGCCG AGCTGGACAT CACCGACCAC GAGGTGACTC GCATCGCCCA 
    GCTGATCGAC GGCAAGGTCG CCGCGCTGGT GCCGGGCTGG AGGCCGGGTC 
    CAGCGACGGA CGACGACGAC GACGACGATC TCGTCGGCGG CGGCGATGAT 
    CCGGACGCGC CGGGCGGCGC CGCCGCCGCC TGCTGCAAGA ACTGCCGGCC 
    GGCGGCGTCG TCGTCGTCGT CCTGCGGCTC GCTCGTCGAC TTCATGTCAT 
    CGGCGGCGGC GGCGGAGCGC CATGGCTGCA GGCGGTGCGC CGAGCTGCAC 
    GGCCGGTTTG AGGAGATCAC GTTCCAAGCC GACGACGACG AGGAGGAGCA 
    GCATTTGCAG GGGAGCTCCT CTGACACCGG AGGCAGCAAC CATGAGCAGC 
    ACGCCATGGG CAAGGACAAG GAGGTCATGA ACATCAATGG CATTGCACAA 
    GATGGCACAG TACAAGGTTC AGAACAGCCA TGATCAGTAA TTCAGTATGA 
    TGATGATGAA CATCCGAAGA TCGAGCAATT CGACGCTGAT AGGCGATACG 
    GATCGGCGAT GTTTACAACC ATTGATGGGT TCTTGGATTT GAGCAATGGC 
    GCGAGTCGGT GCCGCCACCA TGATCATGAC CATGGTAGCT CAAAGGATTC 
    ATGATCATTG TGAGGGGGAA TTGCTCATTG TGAGGGGGAA TTGCTGACAG 
    CAATCTCGAT CAGCCGCTGC TCACTTTCAG AGGTTACCTT GCCGACACAT 
    TGCAAGAGCA ACAAAGTCTG TACTGTTGAA CAATGCTACT GACGTTCGAC 
    ATGCCCTTCT GACAAAGTAA ATCTACAGTT TCAAGATTGG ATTTGCTCGT 
    CTTTTTTTCA GAGATTTAGC ATATATTGTA GGGAAGAAAC TGAAAGATGT 
    AGTATAACGT TTTGTGACTG TGCTATGAAT CTGAAGAAGA TAGGGTACAG 
    TTTAGGTAGG CC

    Gene models with high sequence identity

    1. AT3G04910.1 [+] show detail - with no lysine (K) kinase 1
      E-value: 1e-121; Score: 132.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther SERINE/THREONINE-PROTEIN KINASE WNK-RELATED 8.6e-122
    HMMPanther SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO 8.6e-122
    HMMPanther SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO 1.2e-19
    Gene3D no description 9.3e-21
    Gene3D no description 2.8e-35
    superfamily Protein kinase-like domain 3.6e-55
    ProfileScan Protein kinase, catalytic domain 33.884
    PatternScan Serine/threonine-protein kinase, active site 0
    HMMSmart Serine/threonine-protein kinase domain 1.3e-28
    HMMSmart Tyrosine-protein kinase, catalytic domain 1e-09
    HMMPfam Serine/threonine-protein kinase-like domain 1.2e-40

    See the detailed result >

    AT3G04910.1

    Model type
    Protein coding
    Short Description
    with no lysine (K) kinase 1
    Curator Summary
    Serine/threonine protein kinase, whose transcription is regulated by circadian rhythm.
    Computational Description
    with no lysine (K) kinase 1 (WNK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, circadian rhythm; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G28080.2); Has 101031 Blast hits to 100159 proteins in 3121 species: Archae - 77; Bacteria - 9426; Metazoa - 36599; Fungi - 9721; Plants - 28152; Viruses - 368; Other Eukaryotes - 16688 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR