K28146

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K28146

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K28146

Determination of introduced cDNA(s)

J013146G08 - Rice Full-length cDNAs - Original: J013146G08

full reading [+] show sequence

TAAGCGAAGC AAAGCAGCGG CGACACGGCG GCGATGGCTG CGGCGGCGAG 
GAAGGGGACG GCGACGCCGC TGGGCGCGGT GTTCTCGCCG GAGGAGACGA 
GGAGGGCCGT GGCGCGGGTT GCCGAGGCCG TCGCCGACCG CCGCGCCGAG 
CTCGGCCGCC TCCAGGGCTT CTCCGCCGAC AACGCCGCCC TCGTCTCCCT 
CGTCCAGAGG CTCCCCGACG AGGTCTCCCA CGACATCATG GTTCCCTTCG 
GTGGCGCGGC ATTTTTCCCC GGCCGTTTAA TCCACACGAA TGAACTACTG 
GGGAGGGGTA CTATGTGGAG AGATCCGCCA AGCAGACCAC CGAGATATTG 
CACAGGAGGG GGATGGAGCT GGAAGCTCAA GTGGAAGCGA TGAAGGCAAC 
TATCTCTGAC CTTGAAGCTG AGGCGAAGTT CTTCGAATCA ACTGCCGCCG 
AGGCTTCTGA AGGTCTTATT GAAATAAGGG AAGAATATGA TGAAGATACA 
GAAATAAATT CATCAACATT GGATGCTTCA AGTTCTGCTT CAGGCATGCC 
AGACAAAGAC AGGGAATATA CTCAAATCAT GGCAAGGTTA GATGAACTTG 
AAATGGAAGA AAATGATGCT GGTAGTACTT CTGAAGAAGA TGGAGAAGAT 
GATGAGGATG ACGAAGATGA TGAGGAAGAT GCTGGACCAA GTGAGGATGA 
TAAGGAAGAT GAGGAAGAAG AGAATATTCT AATTGATGAC AATGATCATC 
ATAATGCTAG TTTGGGTGCC TCATTTTCTG GAAGTGGTGG TAATGATCAG 
AGTCATGAAA GTGCGCAGCT GAAGAGTGCT CTGAAGAAGC CAGGAGGAAG 
GGAAATACTG AAAAGCGCTT CTTTTGCACC CTCAGCCAGC ACACCTCACT 
CGGTTTTTCC AGGACAGACT TCTACAATAA ACCCTGGAAT TCAGCTTCCT 
CTTAAAAAAG CTGTTTCTTT TCAAGATGAT AACAGGCATA CAGTTGGTCC 
ATCCAAGTCT CTTCCATTGC CACAGGGTCC AAAACACTCG AGTCCAATAC 
TTCAGGTTTC TTCAGATAAC CCTACATCTC ATGATCGGAA GATAATGTCA 
AGTGGACAAA AGGCCTTCAC AGGGTCTATT ATTGAACATG ATGATAATAT 
TTCAACCCTT CAACCTTCAA AGAGTGCTGC TTTGCAGAAT CCTGCTAGTT 
CATCTTCAAG ACCTGTATCT AGATTCAAGA TGCAGAAGGG AGGGCGTTGA 
GACCATATCG TTAACACTAG GATGAGTGCG AAACCGTCAA CTTAGATCTT 
TGGTAACATC TGCATTGTCA ACAACTGCTA TAAGCGAAAG CTGCATTGTC 
AACAACTGCT ATAAGCGAAA GCGACAGGTG TGGTATCAAG ACCACAGTTC 
TAAGATGAGA CCTTGGAGCT AGCTTGTCTG TGCGCGGATG AGAAAATTCT 
TTATACCCAG AGTGTAGGGC TGTAGGCACT AGTTTTGGTC TGAGGATTCA 
GACATTTAGG GAAAGTTCCT GTAATTCTTG TTCTAGTTTA CATTGATGCC 
AACAGCCCAA CGCATTGATG GGTGTTACTT GTGATAGCTC TGTGCAAGCA 
TTTTGTGATT TGTGTAGCAC TACATACAGT GACCTCATCT GGTCCTTGCA 
TTTGCCTTTA TGGAATGCAA CTTGAGTGGA ATTGTATGTG

Gene models with high sequence identity

AT1G03760.1 [+] show detail - Prefoldin chaperone subunit family protein
E-value: 1e-31; Score: 66.60

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Prefoldin alpha-like	6.8e-07
HMMPanther	RNA POLYMERASE II SUBUNIT 5-MEDIATING PROTEIN	5.1e-14
HMMPanther	RNA POLYMERASE II SUBUNIT 5-MEDIATING PROTEIN	1.2e-05
Coil	coiled-coil	0

See the detailed result >

AT1G03760.1

Model type: Protein coding
Short Description: Prefoldin chaperone subunit family protein
Computational Description: Prefoldin chaperone subunit family protein; FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding; LOCATED IN: prefoldin complex; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Prefoldin alpha-like (InterPro:IPR004127), Prefoldin (InterPro:IPR009053); Has 429 Blast hits to 422 proteins in 142 species: Archae - 27; Bacteria - 8; Metazoa - 215; Fungi - 17; Plants - 37; Viruses - 4; Other Eukaryotes - 121 (source: NCBI BLink).
Link: InterPro Scan - TAIR