K28317

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K28317

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K28317

Determination of introduced cDNA(s)

J033076M10 - Rice Full-length cDNAs - Original: J033076M10

full reading [+] show sequence

GGCATAAACG CTAGCTCGTC CACTCTCCTC TACTAGCAGC AGCAGTAGAA 
GACAACACAC ACGCAGCAGC AGCTGCAGCA AGGCAGTAGG AGAGGAGTTG 
GAGGGAGGAG AGGGAGCTCC AAGAATCACC AGAGAGCGAG CAAGAGAGAG 
GTGAGAAGTA AGGTGAGCTC AGAAGGATTT GGTAAGGGAT CTCATTATGC 
AGACTTCAAA AACCAGGAAT GGGCCTTCAG ATGCCCCACA GAAGGCTTCT 
CCGGCAACAC CACGGTCATC TCGGGTGGCG AAAACTGGAG GGAATGAAAC 
TGACTCTGCA GGGATCACAC CAACAAGAAC CACTCCAGAG AGGAGCCCTA 
AGGTCACCGA GCGTCGGTCA CCACGAAGCC CAATTACTGA GAAGCGCCCA 
AGTAGGCTGT CCGAGTTGGA GTCCAGGGTC AGCCAGCTGC AAGATGAGCT 
GAAGAAGGCC AAGGAGCAGC TGAGCTTATC GGAGTCACGA AGACGCCACA 
CACAACAGGA AGCAGAGGAA GCAAAAAAGC AGGAGCAGGC TGCAACCTCA 
AAGCTCGAGG ACCTACAGCG CCAGCTTGCC GAGTTCTCAG CTGCGGAGGA 
GTCCCGACTC CAGGAACTGC GGAAGGTCTC ACTGGAGCGT GACCGTGCTT 
GGGAGTCTGA GCTCGAGGCT GTGAAGAAGC AGCAGTCAGT GGATTCAGCT 
GCTCTGAGCT CAGCCTTGTC TGAAATTCAG AGGTTGAAGC AGCAGCTGGG 
GGCCACCACA GAGTCTGATG CAGCTCGTGC CAAGCAATGC GAGTTTGCGG 
AGTCTGAGCT CGAGGGCTTG AAGCAGGAGA TGGAGCTCCG GCTTGCGACC 
ATCGAGGGCC TGAAGGTAAA CGTTGGCGAG AGCGACAAGG CTGTAGCTGA 
GGCGAACGCG GTGGCAGCTG AGACCAAGAA GCAGCTTGAG ATGGCACAAG 
CTACTATTGA CTCGCTGCTT GCTGAGGGTG CCCGGTTGCA AGAATGCCTG 
AGGTCGAAGG ACGCAGAGCT CGGCCAGTCC ATGGCTCGAT TAGCCACACT 
GGAGGAAGAT CTGAAGAAGG CACATAACAA GGATGATGTT GATGGCAGCT 
TTGGCAGCCC TGATCATGGT GAAGCTGTGG AGAAGGTGGT GGTAACTATC 
CCCAATGGCA ATGGCAGCTG TGGTGGTTCT GGCGCAGAGA TTGAGCAGCT 
GCGGACGGCG CTCGAGGTGG CTGAGATTAG GTACCAGGAA GAACAAACTC 
GCACGACGAT CGAGACGAAG ACCGCCTACG AAATGCTGGA GAATGCCAAG 
TCAGAGTACG ACCGCAGAGT GCGCGATCTT GAGCTGGAGC TGAAGAGCAA 
GAACGATGAG CTCACTGAAG CGAAGGCCAC TTTGGCTGTC AGGTGTGACG 
GGAAGAGCGA TGTGATGCAG CCAGAGCTTG AGGCGAAGCT GATGAAGTCG 
ATCACCGATG CGACGGAGCT GAAGGCGAGC CTGATGGACA AGGAGACGGC 
GCTGCAGAGC GTGATGGAGG AGAACGAGAC GCTCAAGTCG GAGGCGGGGA 
AGAAGGCGGC GGAGGTGCAG CGGAGGTACG AGGCGGCGGT GGCGGAGCTG 
GAGCTGGCCA AGGCGGCGGA GCAGGACGTC CGGATGCGGC TCGGGTACGT 
GACGGAGGAG GCCGACAAGA GCAGCCGGCG CGCCGCCAGG GCGTCGGAGC 
AGCTGGACGC GGCGCAGGCG GCCAGCGTCG AGATGGAGGC CGAGCTGCGG 
CGCCTCCGGG TGCAGTCTGA CCAGTGGCGC AAGGCGGCCG AGGCAGCGGC 
GGCGGCGCTG GGAGGAGGCG GTGGCGGCAT TGGCAGGAAC GTGGAGCGGA 
CGGGGTCTCT GGAGCCGGCG GAGTACACCA ACTCCATGAT CGGCGGGAAG 
CTGGCGAGCT CGCCGTTCTC CGACGAGCCG GAGGAGGAGT CGCCGAAGCG 
GCGCAACAGC GGCGTGCTCC GGCGGATGAG CGGGCTGTGG AAGAAGAGCC 
CCAAGTGACC ATCGACGCCA TGGACAGCTT GGTGTGGTGT GTGTACTAGA 
AAGAACTGAA ACTGACTAGC TAGGCTGAGC TGATCTGATC ACGCCATGGA 
TGGGTTTAGC TGCAAACACT GTGAATCAAA GCTAGTTAAG TTAATTACTA 
CTGGTTGGTT AGTTGGTTTT GCTGCTGTGG TCGCAGTAAA AAAAGAATGT 
TAAGAACTCT TGTAATGATG TTGGAGATGA GGAGCATCTA CATTTTGGGC 
TGCATGCTGT CG

Gene models with high sequence identity

AT2G37080.1 [+] show detail - ROP interactive partner 3
E-value: 2e-79; Score: 294.00

InterPro Scan Digest

Program	Description	E-value
Coil	coiled-coil	0
Coil	coiled-coil	0
Coil	coiled-coil	0
Coil	coiled-coil	0
Coil	coiled-coil	0
Coil	coiled-coil	0
Coil	coiled-coil	0
Coil	coiled-coil	0

See the detailed result >

AT2G37080.1

Model type: Protein coding
Short Description: ROP interactive partner 3
Computational Description: ROP interactive partner 3 (RIP3); LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: ROP interactive partner 4 (TAIR:AT3G53350.1); Has 147635 Blast hits to 77239 proteins in 3391 species: Archae - 1987; Bacteria - 30902; Metazoa - 62424; Fungi - 12574; Plants - 8109; Viruses - 683; Other Eukaryotes - 30956 (source: NCBI BLink).
Link: InterPro Scan - TAIR