K29309

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K29309

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K29309

Determination of introduced cDNA(s)

J013096O22 - Rice Full-length cDNAs - Original: J013096O22

full reading [+] show sequence

GGGCCTGGAG CTGGAAGCCT TGTAAGTGGA ACAGAGACAG TCAGCTCCAG 
CCACTGCTCC TCGGCTTCTT CTTCGTCCGC CTCTGGACGG CGGCCATCGA 
GAGGGTGGGG CTCCTCCGGC AGCCGTTCAC GCGCCAGGAG AACACCGTCA 
TCCAGACCTG CGTCGTCGCC GGCTACGACA TCGCCTTCAG CGGCGGCTTT 
GGTAACTACA TATTGTCCAT GAGTGAAAGA ATCGCTGGGC TGGGAACCGA 
GGCAAATAAT GCTCAAAACA TAAAAAATCC CCATCTAGGA TGGATAATTG 
GTTTTCTGTT CTTGGTCAGC TTCATTGGGC TCTTTGGTCT TGTGCCCTTG 
AGAAAGGTTA TGATCATTGA CTACAAGCTA ACTTATCCAA GCGGCACTGC 
AACTGCCTTC CTCATAAACG GCTTTCACAC GCCCCATGGA GCCAAGATTG 
CAGCGAAGCA AGTAAAGAAA CTCGGTATAT TCTTCATCCT CAGCTTCTTC 
TGGGGTTTCT TTCAGTGGTT CTACACAGCT ACCGATGATT GCGGATTCCA 
TAAATTCCCA TCACTAGGCC TTCAAGCTTT CCAACACAAG TTCTTCTTTG 
ACTTCTCACC TACTTATGTC GGAGTGGGAA TGATTTGCCC ACACATTGTT 
AACGTATCTG TTCTCCTTGG AGGGATCCTC TCATGGGGCA TCATGTGGCC 
TCTCATAGCC AAGAAAAGGG GAGATTGGTT TTCTGCTGAT CTCCCTGACG 
GTAGTCTTCA TGGAATGCAA GGGTACCGGG TCTTCATAGC CATTGCCTTG 
ATTCTTGGGG ATGGCCTCTA CAACTTTCTC AAGATGATTA TTCTCACAGC 
CTTCTCGCTA AGATCTCAAA TCAAGAAGAA AAATGCTAGT ACACTTCCAG 
TCTCTGATGA TGGCATGGTT ACCACTACTG CAGCTGTCTC ATACGACGAG 
GAGCGGCGCA ACGAACTCTT TGTCAAAGAT CAAATTCCAT GGTACGTTGC 
ATATGGAGGC TATGCTGTTG TTGCTGCCAT TTCTATCGGT ACTGTCCCGC 
AGATAATCCC ACAGCTGAAG TGGTACCAAA TCTTGGTAGC CTATATCGTC 
GCGCCAATTC TTGCCTTCTG CAATGCCTAC GGAACTGGCC TCACTGACTG 
GTCTCTTGTT ACAACCTATG GAAAGCTTGC AATCTTTGCA TTTGGTGCAT 
GGACCGGTGC TTCACATGGT GGTGTTCTTG CTGGCCTGGC TGCCTGTGGT 
GTGATGATGA ACATTGTGTC TACTGCTGCT GACCTGATGC AGGACTTCAA 
AACAGGGTAC CTCACACTGG CCTCACCCAG GTCAATGTTC GTCAACCAAG 
TCATTGGCAC TGCAATGGGC TGTGTCATTG CTCCCTGTGT GTTCTGGCTT 
TTCTACAAGG CCTTTGATAA TATTGGCATC AGTGGCAGCG ATTACCCAGC 
GCCAAATGCT GCCGTCTTCC GGAGCATAGC GATACTAGGT GTTGATGGCT 
TCTCCTCGCT TCCAAAGAAC TGCCTCAATC TCTGTTACGC GTTCTTTGCT 
GCTGCAATTG TCGTCAACCT GATAAGAGAT CTTGTGCCAA AGGTGTCAAG 
GTTTATACCG ATCCCGATGG CTATGGCGAT ACCTTTCTAC ATAGGATCAT 
ATTTCGCGAT TGATATGTTC ATCGGGACAG TCATATTGTT TGTCTGGCAA 
CGAGTGGACA GGGCGAAAGC AGACACGTAT GGACCTGCAG TCGCTTCAGG 
CATGATATGT GGTGATGGAA TTTGGGTTTT GCCTCAGTCG GTGCTTGCTC 
TTGCCAAGGT GAAGCCTCCA ATCTGCATGA AGTTTCTGTC GAGAAGGACG 
AATGACAAAG TGGATGCTTT TCTTACAACA TTGGGAAAAT AAGTTGCAAC 
AACGATTCTG ATGAAGAAAA GATTCAGTTG AACATTATTA CATTAGCCCG 
TGTATATATT GGATAATTTT CTTTTTTTTT CCAGCAGATC CATGTCAGTA 
AGAATCCAAT GAAGTGTGGC ATACTATACG ATAGTAGATA AATAAGTGTG 
TACAGAGACA AGAATGGGAA TAAATTATCT TGTTTACGTT

Gene models with high sequence identity

AT1G65730.1 [+] show detail - YELLOW STRIPE like 7
E-value: 0; Score: 792.00

InterPro Scan Digest

Program	Description	E-value
HMMTigr	Oligopeptide transporter OPT superfamily	2.4e-71
HMMPfam	Oligopeptide transporter OPT superfamily	1.1e-129

See the detailed result >

AT1G65730.1

Model type: Protein coding
Short Description: YELLOW STRIPE like 7
Curator Summary: Arabidopsis thaliana metal-nicotianamine transporter YSL4
Computational Description: YELLOW STRIPE like 7 (YSL7); FUNCTIONS IN: oligopeptide transporter activity; INVOLVED IN: oligopeptide transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: YELLOW STRIPE like 5 (TAIR:AT3G17650.1); Has 1836 Blast hits to 1794 proteins in 556 species: Archae - 19; Bacteria - 893; Metazoa - 0; Fungi - 266; Plants - 510; Viruses - 1; Other Eukaryotes - 147 (source: NCBI BLink).
Link: InterPro Scan - TAIR