K29333

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K29333

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K29333

Determination of introduced cDNA(s)

  • J023088A16 - Rice Full-length cDNAs - Original: J023088A16

    full reading [+] show sequence

    Nucleotide sequence: J023088A16 - full reading 
    GGGCGTTCCG GCGGTTGCTG CAACCTCCCC GCCGCCGCCG CCGCCGCCAT 
    TCCTCCCCCC GCCCGCCGGA ACCACCGCCG CCGCGCCATG CCCATCTCCT 
    CCTTGTTCTT CTTCTTCCTC CTCCTGCAGC AGGAGGACCC CTACTAGATT 
    CTTCTTCTCC CTCTTTTGTC TTCTTTCTTG GTACGGCGGC GGAGGAGGAG 
    CCGATGGGCA GCCTTTGCTC CAAGGACAGC GTCGCCGAGG AGCTCACGCC 
    GCAGCCGCCG CCGGCTGCGG CAGCGGCGGC GGCGCCCGTG GGGAGGCTGC 
    AGAAGACGGA GAGCCAGTCG TTGAAGCAGC TCATCACGCT CACCGCCAAG 
    GAGGACGCCG CGGTGGTCGC CCCCGTCGTG CACGCCGTCA TCACCCGGGC 
    GGAGTCCAAC GCCAAGGCCA AGTCCAACGC CAAGGCCAAG TCCGCCGCCG 
    CCGTGCCGCC GGTCGTCGTG ATCACGTCGC TCAACAAGTC GTACAGCACC 
    GCGGGTGCGC CCGCACACCA CCACCGGCTG TCGACCGTCG ACGTCCCGCA 
    GGTGGTCCCC GGCGGCGTGC CGCAGGGGTT CTCCGGCGAG CACGTGATCG 
    CCGGGTGGCC GTCGTGGCTG ACCTCCGTCG CCGGCGAGGT GGTGCAGGGG 
    TGGCTGCCGC GGCGCGCCGA CACGTTCGAG CGGCTGGACA AGATCGGGCA 
    GGGCACGTAC AGCAACGTGT ACAAGGCCCG GGACCTGGAG ACCGGCAAGG 
    TCGTGGCGCT CAAGCGCGTC CGCTTCGTCA ACATGGACCC GGAGAGCGTG 
    CGGTTCATGG CGCGGGAGAT CCACGTCCTC CGCCGCCTCG ACGGCCACCC 
    CAACGTCGTC CGCCTCGAGG GCATCGTCAC GTCGCGCCTC TCCCACAGCC 
    TCTACCTCGT CTTCGAGTAC ATGGACCACG ACCTCGCCGG CCTCGCCGCC 
    ACGCCGGGGC TGCGCTTCAC GGAGCCGCAG GTGAAGTGCC TCATGGCGCA 
    GATCCTCGCC GGGCTGCGCC ACTGCCACGA CCGGGGCGTG CTCCACCGCG 
    ACATCAAGGG CGCCAACCTG CTGATCGGCG GCGACGGCGC GCTCAAGATC 
    GCCGACTTTG GCCTCGCCAC CTTCTTCGAC GCCGCCAGGC CGCAGCCGCT 
    CACCAGCCGC GTCGTCACGC TCTGGTACCG GCCGCCGGAG CTCCTCCTCG 
    GCGCCACCGA GTACGGCGTC GCCGTCGACC TCTGGAGCAC CGGCTGCATC 
    CTCGCCGAGC TTCTCGCCGG CAAGCCCATC TTGCCCGGCC AAACCGAGAT 
    CGAGCAGCTG CACAAGATCT TCAAGCTGTG CGGGTCGCCG TCGGAGGAGT 
    ACTGGGCGAA GGCGAAGCTG CCGGACGTGA CGCTGTTCAA GCCGCAGCGG 
    CCGTACCGGC GGAAGATCGC CGAGACGTTC AGGGACTTCT CGCCGCCGGC 
    GCTCGACCTT CTCGACACGC TGCTCGCCAT CGAGCCGTCC GACCGGGGCA 
    CCGCCGCCGC CGCCCTCGAC AGCGACTTCT TCAGGAGCAA GCCGCTGGCG 
    TGCGACCCGG CGAGCTTGCC CAAGCTGCCG CCGAGCAAGG AGTACGACGC 
    CAAGCTCCGC GGCAAGGAGG CCGCCATGAG GCAAAACGCG ACGGCGGCCA 
    TCGGAGGCAA GGGCTCCATG TCCGTCAAGC CGGGGAGGAA CGAGCAGTCC 
    AAGGCGGCGG CGCCGGCGCA GGACGCCGTT GGAGGAGATC ACCAGAGGAG 
    GCAGGCGGCG GCGGCGGCGC GCGTGGTGAA CCCGAGGAGC GCGAGCCACC 
    ACTACAGCTC GCTGGAGGAC AGCGTGCCGG GGTTCCGCAT GGAGCCGCCG 
    GCGGCCGCGG GGCCGCCGGC GGCGATGCAG AGCGGCGGGT TCGGGTCGAC 
    GTGGTACAGG AAGGACCACG CCGCCACCGG CGACCCGCGC GCCACCACGT 
    CACGCGCGGC CAGCGCCTCC GTCAGGGTGT CCAACTCCGT CGCCGGCGGC 
    GCGCAGCTCA CGTCGCAGCG GTCGTACGCA CATTCCCGCG GCACCGACCT 
    CCACCCGAGC TCGTCGGCGG CGAGGCACGC CAACTCCCGC TACAACCGCC 
    TCGACGTCGC CGAGCCCGCC AACGCGCTCG ACCGGCCGGG CTCCAGCTCC 
    ACCCACCAAA AGGACCTCTC CGCCGCCGCT CCGGCCACCG GGTTCGGAGG 
    GAGGAACAAG AGGATCCACT ACTCCGGCCC GCTGGTGCCG CCGGGCGGCA 
    ACATGGAGGA CATGCTCCGG GAGCACGAGC GGCAGATCCA GCAGGCGGTG 
    CGCAAGGCGC GGGTCGACAA GGAGAGGACG AATCACCACG GCAACAGCAG 
    CAGCAGTAAC AACAACAGAT TGCAATGCAA TGCAGGGAGA TGATCTTCAT 
    GGATGGAGGA GAGTAGAAAG AAGACCTGAT GAGGTGAAGA TCTCTGATGG 
    AGGGTGCAGG CAGGCAGACG GCGACAGCGA CGGCGGCGCG GAACTCGGGG 
    TATAGATATC TGCAATTGAA GAGCTGGGGG GCTTTTCTTG ATCCATGTGT 
    ATAAATAGCA CACTGTTAGA GAGGGTTTTG GGAAGTCTGA TGAGGAGGAA 
    CAAGCCCTGT AAAAACACGG ATTGTAAAAG GCCAAATGGA AAACTGTGTA 
    TATCTTGCTG ATCGAAGTGA TGCAACAGAC TTCAATGACC TAGTTT

    Gene models with high sequence identity

    1. AT1G09600.1 [+] show detail - Protein kinase superfamily protein
      E-value: 1e-153; Score: 541.00

     

    InterPro Scan Digest

    Program Description E-value
    PatternScan Protein kinase, ATP binding site 0
    PatternScan Serine/threonine-protein kinase, active site 0
    HMMSmart Serine/threonine-protein kinase domain 5.7e-92
    HMMSmart Tyrosine-protein kinase, catalytic domain 1.4e-09
    Gene3D no description 1.5e-62
    Coil coiled-coil 0
    HMMPfam Serine/threonine-protein kinase-like domain 4e-63
    superfamily Protein kinase-like domain 2.3e-89
    ProfileScan Protein kinase, catalytic domain 45.149
    HMMPanther CYCLIN-DEPENDENT PROTEIN KINASE-LIKE 3e-181
    HMMPanther CDC2, MAP KINASE-RELATED 3e-181

    See the detailed result >

    AT1G09600.1

    Model type
    Protein coding
    Short Description
    Protein kinase superfamily protein
    Computational Description
    Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G57700.1); Has 123498 Blast hits to 122030 proteins in 4353 species: Archae - 93; Bacteria - 13546; Metazoa - 45885; Fungi - 12568; Plants - 30937; Viruses - 467; Other Eukaryotes - 20002 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR