K29613

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K29613

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K29613

Determination of introduced cDNA(s)

  • J013030E14 - Rice Full-length cDNAs - Original: J013030E14

    full reading [+] show sequence

    Nucleotide sequence: J013030E14 - full reading 
    GGTTGGCCGG CCGTGCGGCC CGTGCCTCCT GCTATAGTGC TATCCAAACT 
    GCGGTCCCGC CGGAGCCACG GGCCACGGCT ACCCCTCGAC CGCATCGCCT 
    CCTCTCCTCG CGCCCTCCGC CGCCGCCGTA GCCTTCTCCC CTCCCCTGTG 
    CGGAATCCTC CACGCGCGCA CGGCCGGCGA CCAGGGAACT TCAGCATGCA 
    ACAAATGGCC GTATCTGCAT TCACTGCAAA CCCATCCTCA TCACATGGCA 
    ATACCTTATC GGGGTTGTGC TCCCGTCGGC CTGAGATATG GCACAGGAGA 
    CGCATCGGCA GCAGAATTCG GGCGCAGGCG CAGTCGCAGA TGCAGTATCG 
    GAAGCTGGGA GATTCAGACC TTGTCATCAG TGAGGTCACT CTTGGAACAA 
    TGACATTTGG AGAGCAAAAC ACGGAGAAGG AAGCGCACGA TATTCTTTCT 
    TATTCTTTCG ATCAAGGTGT CAATATCCTT GACACAGCAG AAATGTATCC 
    AGTGCCACCC AGAAAAGAGA CTCAAGGAAG AACTGATCTA TATATAGGCA 
    GTTGGATGCA ATCAAAGCCA CGAGATAAGA TTATTCTAGC CACAAAAGTT 
    TCAGGTTACT CAGAGCGATC TACTTTTCTC CGGGACAATG CGAAAGTAGT 
    TCGTGTTGAT GCTGCCAATA TCAAGGAAAG TGTCGAAAAG AGTCTTTCCC 
    GCTTATCTAC AGACTACATT GATTTACTCC AGATACACTG GCCAGATAGG 
    TATGTTCCAC TATTTGGTGA ATACTGTTAC AACCCAACCA AATGGAGGCC 
    AAGTGTTCCA TTTGAGGAAC AGTTGAAAGC TTTCCAAGAG CTAATTGATG 
    AAGGAAAGGT TCGCTATATT GGTGTTTCCA ATGAAACTTC ATATGGAGTG 
    ATGGAGTTTG TACATGCTGC AAAGGTTCAA GGACTTCCAA AGATTGTGAG 
    CATCCAGAAC AGTTATAGTC TAATTGTGAG ATGTCACTTT GAAGTTGACC 
    TTGTTGAAGT GTGCCACCCA AATAACTGTA ATGTTGGGTT GCTTGCCTAC 
    TCTCCATTGG CTGGAGGTGT TCTCACTGGG AAGTATATTG ATACTAACCC 
    TGACATATCA AAGAAGAGCA GGCTAAATCT CTTCCCTGGA TACATGGAGC 
    GCTACAATGC ATCGTTGGCT AAAGAAGCAA CGAATGAATA TGTCAAGCTT 
    GCCAAGAAGC ACGGCCTAAC TCCAGTCCAG CTTGCACTGG GCTTTGTGCG 
    TGACCGTCGA TTCACAGCTA GCACAATCAT CGGAGCAACG ACCATGGATC 
    AGTTGAAGGA GAACATTGAT GCATTTACCA GTGCTCCACG GCCTTTGGCA 
    CCGGAAGTTC TTGATGACAT CGAATCCCTC TTCAAGAGAT ACCGAGACCC 
    AACACTTTCG TAGGTGAGGA TAAAGAAAAA AGAACGCTTT CGTAGGTGTT 
    TATTCATCTT TTTTTCCTAT GAATGTGCCT TCCACAGACA GGAGCCCAGA 
    AACTAGTTGT GCTTTTGTGG TTTCACCGTA TCATCCATGC CAACAAGACA 
    TGGATTTGTC TATTCTGTTG ATTTTATGAT TAATGGCACC ACAAATTTTT 
    TTTCCC

    Gene models with high sequence identity

    1. AT1G04420.1 [+] show detail - NAD(P)-linked oxidoreductase superfamily protein
      E-value: 8e-157; Score: 550.00

     

    InterPro Scan Digest

    Program Description E-value
    FPrintScan Aldo/keto reductase subgroup 1.7e-08
    FPrintScan Aldo/keto reductase subgroup 1.7e-08
    Gene3D Aldo/keto reductase 2.3e-91
    superfamily Aldo/keto reductase 8.1e-99
    HMMPanther ALDO/KETO REDUCTASE 1.1e-125
    HMMPanther Aldo/keto reductase 1.1e-125
    HMMPfam Aldo/keto reductase 1.2e-70

    See the detailed result >

    AT1G04420.1

    Model type
    Protein coding
    Short Description
    NAD(P)-linked oxidoreductase superfamily protein
    Computational Description
    NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: potassium channel beta subunit 1 (TAIR:AT1G04690.1); Has 28623 Blast hits to 28597 proteins in 2530 species: Archae - 619; Bacteria - 18927; Metazoa - 1497; Fungi - 1929; Plants - 977; Viruses - 0; Other Eukaryotes - 4674 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR