K30423

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K30423

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K30423

Determination of introduced cDNA(s)

  • J033108N21 - Rice Full-length cDNAs - Original: J033108N21

    full reading [+] show sequence

    Nucleotide sequence: J033108N21 - full reading 
    GAGTACTCCG CTCCGCGTCT AGCCGCGGGT GACGTCAGCA CCACCACCAT 
    CTGCTTCCCC CTCCCTCCCT CCCTCCCGTC TCCTCCCCGA TTCCATCGCA 
    TCCGCATACA AACCCCAACC CTAGCCGTCT CCGTGCTAGG GCCGCCGCCG 
    GCGAGGAGGC GAAGGGCGGC GAGGAGGAAG GAGCCAGAAG TCGCCGTCGA 
    GGCTGCTCCG GAGGCGGAAG AGGGGAGGGA GGAGGAGATC GAGGTCGCGG 
    ATTTGGGGAG GGAAGGCGGC GGAGAGAAGA AGATGGAAGG CCCGGACAGC 
    GGGGCGCGCA GCGCCGACAA GCAGGCCGTC GAGGACGAGG GGAATACCAC 
    TCCAGTACCT GATACGGTCC AGGTGGGCAG TTCACCAAAG TATAGAGTTG 
    ATAAAAAGCT TGGTAAAGGA GGATTTGGCC AAGTATATGT TGGCCGCCGC 
    ATGTTAGCTA ACGGTCCAGG TGCTTCTGAG GTGGCGCTAA AGTTTGAACA 
    TAGAACCAGT AAAGGATGCA ACCATGGGCC TCCTTACGAA TGGCAGGTTT 
    ACAACGCCAT CGGTGGCATT CATGGGGTTC CTCGAGTCCA CTATAAAGGA 
    CGTCAAGGCG AATACTATGT TATAGTTATG GATATGCTGG GACCCAGTCT 
    TTGGGATGTT TGGAATAATA ATTCTCACAC AATGTCTGTT GAGATGGTTG 
    CGTGCATCGC TATTGAAGCT ATCTCCATAC TTGAGAAAAT GCATTCAAAA 
    GGATATGTTC ATGGGGATGT GAAACCTGAA AATTTCTTGC TAGGGCCTAT 
    TGGAACTCCT GAAGAAAAGA GACTCTTCCT TGTCGATCTT GGTTTAGCTA 
    CCAAGTGGAG AGATGCTTCA ACTGGCCTCC ACGTTGACTA TGACCAGCGA 
    CCTGATGTTT TCAGGGGGAC AGTTCGCTAT GCTAGTGTTC ATGCACATCT 
    AGGGAGAATC GGTAGCCGAA GGGATGATTT AGAATCTCTA GCTTACACAC 
    TAGTTTTTCT TCTACGGGGG CGTCTACCTT GGCAAGGTTA TCAGGGTGAA 
    AACAAGGGTT TCCTTGTGTG CAAAAGAAAA TGGCTACGTC TCCAGAATCA 
    TTGTGCTGCT TTTGCCCACA ACCCTTTAGG GAGTTTGTAG AGTATGTGGT 
    CAACTTGAAG TTTGATGAAG AACCTAACTA TGCAAAGTGT ATATCCCTTT 
    TCGATACTGT AGTGGGCCCA AATCCAGATA TCAGGCCAAT TAACACCGAT 
    GGTGCTCAGA AGCTTATACA TCTAGTTGGC CAAAAGAGAG GTCGCTTATT 
    GATGGAAGAG ACAGATGAAC AACCAAAGAA GAAGATCAGG ATGGGTATGC 
    CTGCAACACA GTGGATTAGT GTTTATAATG CCAGACGGCC TATGAAACAA 
    AGGTATCACT ACAACGTTGC AGATTCAAGG CTTGTACAAC ACATTGACAA 
    AGGGAATGAA GATGGTCTGT TTATCAGTTG CATAACATCT TGCTCAAATC 
    TGTGGGCTCT AATCATGGAT GCTGGCACTG GGTTCACTTC CCAGGTTTAT 
    GAACTTTCAC CACATTTTCT TCACAAGGAA TGGATTATGG ACCAATGGGA 
    AAGGAACTAC TATATAACTG CACTTGCTGG AGCAAATAAT GGGAGTTCCC 
    TGGTAGTGAT GTCAAAAGGA ACAATGTATA CACAACAATC CTACAAAGTA 
    AGTGATACTT TCCCTTTCAA ATGGATAAAC AAGGAATGGA GGGACGGTTT 
    TTATGTGACT TCCATGGCAA CAGCTGGAAG TAGATGGGCA GTTGTTATGT 
    CGCGTAATGC TGGATTTTCT GATCAGGTTG TCGAACTGGA CTTCCTATAC 
    CCCAGTGAGG GAATTCACCA GAGATGGGAC AATGGTTACC GGATAACTGC 
    AACTGCTGCA ACCTGGGATC AGGCTGCATT CGTTTTAAGC GTCCCAAGAA 
    GGAAGCCTAC AGATGAAACT CAAGAGACGC TGAGAACATC TGCTTTCCCT 
    AGTCAACATG TCAAGGAGAA ATGGTCCAAG AATCTCTACC TTGCATCAGT 
    ATGCTATGGA CGTACTGTAT CCTAGAAATC TGGCCATCTA GTTGAAGCCA 
    TTTCGAGTTC TAGGCTTCTC GCATTGGTCT CTGCTCAGAG TGCAGCGGCT 
    TATGTGATGC TGGCAAGTTC TGAATGCGAC TTAGCGTACC CTGACTATCG 
    TGCTGTCGTG AAGATATTTA ATGGCTATCG TTCTTAATTA TAGAAGAGCT 
    TGTACAGTAG TAAATGTTTT TGTAGTTCGT GTAATCGTTC ATGTAGTGTA 
    CTGTTAATTG TAGTGCAAGG CGTTGTCAGA TGTGTACACC TGTCCGATAT 
    GATTGAACTC CTATCTAATC GTGTGAAAGC ATGAGGTTCC TGCTCGCC

    Gene models with high sequence identity

    1. AT2G25760.1 [+] show detail - Protein kinase family protein
      E-value: 7e-174; Score: 608.00

     

    InterPro Scan Digest

    Program Description E-value
    PatternScan Protein kinase, ATP binding site 0
    PatternScan Serine/threonine-protein kinase, active site 0
    ProfileScan Protein kinase, catalytic domain 21.559
    HMMPfam Serine/threonine-protein kinase-like domain 1.3e-21
    Gene3D no description 2.1e-19
    Gene3D no description 3.7e-32
    HMMSmart Serine/threonine-protein kinase domain 1.1e-09
    superfamily Protein kinase-like domain 6.5e-43
    HMMPanther gb def: Hypothetical protein At2g25750 4.2e-97
    HMMPanther CASEIN KINASE-RELATED 4.2e-97
    HMMPanther CASEIN KINASE 1.7e-103
    HMMPanther CASEIN KINASE-RELATED 1.7e-103

    See the detailed result >

    AT2G25760.1

    Model type
    Protein coding
    Short Description
    Protein kinase family protein
    Computational Description
    Protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT3G13670.1); Has 17667 Blast hits to 17599 proteins in 1508 species: Archae - 20; Bacteria - 6581; Metazoa - 4779; Fungi - 1455; Plants - 2098; Viruses - 217; Other Eukaryotes - 2517 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR