K30432

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K30432

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K30432

Determination of introduced cDNA(s)

  • J023039O11 - Rice Full-length cDNAs - Original: J023039O11

    full reading [+] show sequence

    Nucleotide sequence: J023039O11 - full reading 
    GATTGACTCG TGTCGCCGTC TCGCCGAGCG AACCCGACGT CGTCGGCGAT 
    GAGGAAGGCG GCGGCGCTGG CGTCCGCGGC GATGGCCGCA GCAGCAGTAG 
    CGGTAGTCTC CACGGTGTTG CACCAGAGGC AACGTCGGGC GGCGAAGCGG 
    TCAGAGCGCG CGGAGGCCGT GCTGCTGCGG GACCTGCAGG AGCGGTGCGC 
    CGCGCCGGTG GAGCTGCTGC GGCAGGTGGC GGACGCGATG GCCGCGGAGA 
    TGCGCGCGGG GCTCGCCGCC GAGGGCGGGA GCGACCTCCA GATGCTCGTC 
    ACCTACGTTG ACTCCCTCCC CTCCGGGGGT GAGAAAGGGA TGTTTTATGC 
    ACTTGACCTT GGAGGAACAA ATTTCCGTGT TTTACGAGTT CAATTAGGAG 
    GCAAAGAACG TCGAATTATC AAGCAAGACT CAGAAGGGAT ATCCATTCCA 
    CAACATTTAA TGTCCAGCAG TTCACATGAG TTGTTTGATT TTGTTGCTGT 
    GGCTTTAGCA AAATTTGTTG CCTCTGAAGG TGAAGACTGC CATCTTCCTG 
    AGGGTACCCA AAGAGAACTA GGTTTTACAT TCTCCTTTCC AGTGAAACAA 
    AAATCATTGG CATCTGGCAC TCTTATCAAG TGGACGAAGA GTTTTGCAAT 
    TGATGAAATG GTCGGCAAGG ATGTTGTGGC TGAATTAAAC ATGGCTATCA 
    GAAGTCAAGG ACTTGATATG AAAGTCACAG CATTGGTTAA TGATACAGTA 
    GGGACATTAG CTGCTGGGAG ATATGTGAAT CATGATACTA TTGCTGCTGT 
    TATACTGGGA ACAGGTAGTA ATGCAGCGTA CATAGATCAT GCAGATGCAA 
    TTCCAAAATG GCATGGATCC CTGCCCAAGT CTGGAAATAT GGTGTGTTTT 
    TTCAGTCCAT ACTTCTGTAG TTCTGTTTGC TAGTTAGTCC GTCTCCCATT 
    ATCCCAAGGT ACAAGGCATG CAAAAGATCA TGCTTAGCAG TTTATATTGT 
    TTGTAGTCTT GCGCGAATAA GAAAAGGCAA CAATAAAATA TAAGAGGGAC 
    TTTTGCATTG TTGATAATTT TGACGTGTTT ATTTGTTAGT TTCTTTGCTT 
    TGGTAAAAGG TAATAAACAT GGAATGGGGT AACTTTAAGT CCTCACATCT 
    TCCACTTACT GAATTTGATC AAGAGTTGGA TGCAGAAAGT TTGAACCCTG 
    GCAAACAGGT TTACGAGAAA TCGATTTCTG GTATGTATAT GGGGGAACTT 
    GTTCGAAGAA TCTTACTAAA GATGGCTCAA GAAACTCGCA TTTTTGGTGA 
    TAATATACCT CCAAAACTTG AGAGACCATA CATCTTAAGG ACACTTGACA 
    TGCTGATCAT GCATCATGAT ACATCATCTG ATCTCAGAAC AGTTGCCAAC 
    AAGTTGAAAG AAGTCTTGGG GATCGAATAT ACCTCTTTCA CGACGAGGAA 
    ACTGGTTTTG GATGTTTGTG AGGCCATTGC GACACGCGGT GCACGGCTTG 
    CTGCTGCTGG GATATATGGC ATTATCCAAA AGCTTGGTCA GCATTCTGAC 
    AGCCCCAGTA CGAGAAGGTC CGTGATTGCT GTGGATGGAG GGGTCTATAA 
    ATACTACACT TTCTTCAGCC AGTGCATGGA GAGCACTCTG AGTGACATGC 
    TTGGGCAGGA GCTGGCCCCC TCTGTTATGA TCAAGCATGT CAATGATGGC 
    TCAGGCGTTG GGGCAGCTCT CCTGGCAGCC TCTTATTCTC AATACCACCA 
    GGCTGAATCT GCAGATAGTT CATAATATTC TAAAAAAAAG AAGCTGAATC 
    TGCAGATAGC TCTTAATATT CTGAAAAAAC TGTCAAAAAA TAATATTCTG 
    AAAAAAAACT GTGTATTAAG GTGATAAACA ATAGGTTTTG GAGCAATTTT 
    TTTTTTAAGA TAATGGATTA AACCGGCCTC TACATCCAAA CGAGATTCTA 
    GAGCAATAGC AGCTATACAG TTTGCCTAAG GGCTAAATAT CTTGTATTTT 
    GCAAATGTCA ATTGTACATG AACTCTATCT GCAATATCTG TTCAGTGTTT 
    CAGTGGGTCA TAGACACTGT GGTTATATAT C

    Gene models with high sequence identity

    1. AT4G29130.1 [+] show detail - hexokinase 1
      E-value: 2e-85; Score: 314.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Hexokinase 4.3e-57
    HMMPfam Hexokinase 7.9e-58
    FPrintScan Hexokinase 6.6e-33
    FPrintScan Hexokinase 6.6e-33
    FPrintScan Hexokinase 6.6e-33
    FPrintScan Hexokinase 6.6e-33
    FPrintScan Hexokinase 3.6e-26
    FPrintScan Hexokinase 3.6e-26
    FPrintScan Hexokinase 3.6e-26
    superfamily Actin-like ATPase domain 1.1e-69
    superfamily Actin-like ATPase domain 9.7e-08
    superfamily Actin-like ATPase domain 1.1e-61
    HMMPanther Hexokinase 4.4e-91
    HMMPanther Hexokinase 2.5e-88
    Gene3D no description 2.4e-64
    Gene3D no description 1.9e-51

    See the detailed result >

    AT4G29130.1

    Model type
    Protein coding
    Short Description
    hexokinase 1
    Curator Summary
    Encodes a hexokinase (HXK1) in the plant glucose-signaling network. Functions as a glucose sensor to interrelate nutrient, light, and hormone signaling networks for controlling growth and development in response to the changing environment.
    Computational Description
    hexokinase 1 (HXK1); FUNCTIONS IN: fructokinase activity, hexokinase activity, glucokinase activity, zinc ion binding, ATP binding; INVOLVED IN: sugar mediated signaling pathway, hexose catabolic process, glucose mediated signaling pathway, programmed cell death; LOCATED IN: in 6 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Hexokinase, N-terminal (InterPro:IPR022672), Hexokinase, conserved site (InterPro:IPR019807), Hexokinase, C-terminal (InterPro:IPR022673), Hexokinase (InterPro:IPR001312); BEST Arabidopsis thaliana protein match is: hexokinase 2 (TAIR:AT2G19860.1); Has 2426 Blast hits to 2148 proteins in 325 species: Archae - 0; Bacteria - 92; Metazoa - 1300; Fungi - 606; Plants - 290; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR