K30533

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K30533

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K30533

Determination of introduced cDNA(s)

J023091L24 - Rice Full-length cDNAs - Original: J023091L24

full reading [+] show sequence

GTTCCCATTT GGCCACTAGC TTAATCCCTC CTCCCCCATT GGAAGGAAGG 
ACAAGCTCGA GGAGCTCCTC CTCCATGGAG CGACGTGGTA GCCTGTACGG 
CGTCGCGGCG GCGGCGGCGG TGGTGGTGGT GGTGGCAATG GCGGCGGCGG 
CCGGCGGCGA GGCGGCGAGG CTGTCGCCGG AGCACTACCG GTCGACGTGC 
CCCGGCGTGG AGTCCGTCGT GCGGTCGGTG GTGGCGAGGA AGGTGAAGGA 
GACCTTCGTC ACCGTCCCGG CCACGCTCCG CCTCTTCTTC CACGACTGCT 
TCGTCGAGGG GTGTGACGCG TCGGTCATGA TCGCGTCGCG GGGCAACGAC 
GCCGAGAAGG ACTCGCCGGA CAACCTGTCG CTCGCCGGCG ACGGCTTCGA 
CACGGTGGTG CGCGCCAAGG CGGCGGTCGA GAAGAAGTGC CCCGGCGTGG 
TCTCCTGCGC CGACATCCTC GCCATCGCCG CCAGGGACGT CGTCGCCATG 
TCGTCCGGCC CACGCTGGAC CGTCGAGCTT GGCCGGCTAG ACGGCCTCGT 
CTCCAAGTCC GGCGGCGTCG CCGGCAAGCT GCCAGGCCCG GACATGCGCG 
TCAAGGACCT CGCCGCCATA TTCGCCAAGA ACAACCTCAC CGTGCTCGAC 
ATGGTGGCGC TCTCCGGCGC GCACACCGTC GGCTTCGCGC ACTGCACGCG 
CTTCGCCGGC CGGCTGTACG GCCGCGTCGG CGGCGGCGTG GACCCGTCCT 
ACGACCCGGC GTACGCGCGG CAGCTGATGG CGGCGTGCCC GCGCGACGTC 
GCGCCGACCA TCGCCGTCAA CATGGACCCC ATCACCCCGG CCGCCTTCGA 
CAACGCCTAC TACGCCAACC TCGCCGGCGG CCTCGGCCTG TTCACCTCCG 
ACCAGGAGCT CTACACCGAC GCCGCGTCGC GGCCGGCGGT GACCGGCTTC 
GCCAAGAACC AGACGCTCTT CTTCGAGGCG TTCAAGGAGG CCATGGTCAA 
GCTTGGCAGG GTCGGAGTCA AGTCCGGGAA GCATGGAGAG ATCAGAAGAG 
ACTGCACAGC TTTCAACTGA ACATAGTTGC ATAGCTGCAC TGCGACATTT 
GTAAGTTGTA GCAATTGGGG ATTTGATCGT ATATTAAAAA TGAAATCATT 
TCAAGGTAAG AATTTCATAC TTTCTGTTTT CGGTCCAGAA GTCATGGCTG 
AGTGATGAAA GCG

Gene models with high sequence identity

AT5G14130.1 [+] show detail - Peroxidase superfamily protein
E-value: 6e-92; Score: 334.00

InterPro Scan Digest

Program	Description	E-value
Gene3D	no description	4.7e-53
HMMPfam	Haem peroxidase, plant/fungal/bacterial	1.6e-69
superfamily	Haem peroxidase	4.6e-103
FPrintScan	Plant peroxidase	2.1e-55
FPrintScan	Plant peroxidase	2.1e-55
FPrintScan	Plant peroxidase	2.1e-55
FPrintScan	Plant peroxidase	2.1e-55
FPrintScan	Plant peroxidase	2.1e-55
FPrintScan	Plant peroxidase	2.1e-55
FPrintScan	Plant peroxidase	2.1e-55
FPrintScan	Plant peroxidase	2.1e-55
FPrintScan	Plant peroxidase	2.1e-55
FPrintScan	Haem peroxidase, plant/fungal/bacterial	3.5e-30
FPrintScan	Haem peroxidase, plant/fungal/bacterial	3.5e-30
FPrintScan	Haem peroxidase, plant/fungal/bacterial	3.5e-30
FPrintScan	Haem peroxidase, plant/fungal/bacterial	3.5e-30
FPrintScan	Haem peroxidase, plant/fungal/bacterial	3.5e-30
HMMTigr	Twin-arginine translocation pathway, signal sequence	0.074
ProfileScan	Haem peroxidase, plant/fungal/bacterial	73.61
PatternScan	Peroxidases heam-ligand binding site	0
PatternScan	Peroxidase, active site	0

See the detailed result >

AT5G14130.1

Model type: Protein coding
Short Description: Peroxidase superfamily protein
Computational Description: Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, hypocotyl, fruit, root; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT4G37530.1); Has 4547 Blast hits to 4517 proteins in 291 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 177; Plants - 4298; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink).
Link: InterPro Scan - TAIR