K30815

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K30815

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K30815

Determination of introduced cDNA(s)

  • J013002F08 - Rice Full-length cDNAs - Original: J013002F08

    full reading [+] show sequence

    Nucleotide sequence: J013002F08 - full reading 
    GATGGATGAG CTCTCCTTCG GAAGCTTGTG CATGGTCGCT ATGGCCACTC 
    TCGCCCTCGC GTTGGCGCTC ATGGTCATGG GAGCTCATCG CCGCGTCGGC 
    GAGAAGGGAG CAACCACCGG AGCCAAGAAC CTTCCTCCGG GGCCATGGAA 
    CCTCCCCGTC ATCGGCAGCC TCCACCACCT CCTCGGCGCG TCGCCGCCAC 
    ACCGCGCGCT GCTCCGCCTG TCGCGGCGGC ACGGCCCGCT GATGCTGGTG 
    AGGCTCGGCG AGGTGCCCAC CGTGATCGTC TCTGGGTCGG ACGCCGCCAT 
    GGAGGTGCTC AAGGCGCGCG ACCCGGCGTT CGCCGACCGC GCCCGGAGCA 
    CGACGGTCGA CGCCGTCAGC TTCGGCGGGA AGGGCGTCAT CTTCGCGCCC 
    TACGGCGAGC ACTGGCGCCA TGCGCGCAGG GTCTGCCTCG CGGAGCTCCT 
    CAGCGCGCGC CAGGTGCGCC GCCTCGAGTC CATCCGTCAG GAGGAGGTGT 
    CGCGCCTCGT CGACTCCATC ATCGCCGGCA GCAGCAACGC CGCCGCCGTC 
    GACATGACCC GGGCGCTGGC GGCGCTGACG AACGACGTGA TCGCGAGGGC 
    GGTGTTCGGC GGCAAGTGCG CGCGGCAGGA GGAGTACCGC CGGGAGCTCG 
    GCGTGCTGAC GACGCTGGTG GCCGGGTACA GCATGGTGGA CCTGTTCCCG 
    TCGTCGCGCG TGGTGCGGTG GCTGAGCCGC CGCACCGAGC GCCGCCTGAG 
    GAGGAGCCAC GCGGAGATGG CGAGGATCGT CGGCTCGATC ATCGAGGAGC 
    GCAAGGAGAA GAAGGGGAGT GACGCCGGCG TCGGCGCGAA AGACGAAGAC 
    GATGATCTGC TCGGCGTGCT GCTGAGACTG CAGGAGGAAG ACGGCCTCAC 
    CTCCCCTCTC ACGGCGGAGG TCATCGCCGC CCTTGTTACC GTGAGTAACT 
    GCCTATATAC CCTTTACATG TTTCTTCGTC TCTAAGAGCA TCCCAGCAGA 
    TCCTTCATCC GGTAGTCCAT CCGAAATATA GCGCACGGGA GAAGAAAACG 
    GCGCTCCAGC AAATACGGCA TCGAGGCCTA CTCCAAAAAT AGACGATACC 
    AAATCAGAGA GAGTTCGGCC AAAGTGATTT TCTCCTCATG CCATGTCTCA 
    ACGTCTGCGC TTCCGCCCTC ATCTGGAGTT ACGGATCAAC CTCCCCTTCG 
    TCATTGTCGT CGCCCGCTGG CTGCCGCAGC CACTTCTGCG CCCGCTCGCT 
    GTAGCCGTTG CCGCCGCTTC CAATCCGGTC GCCTACTCGC CTCAGCATTC 
    GCCGCCGTCG CCTGCGCGTT ACCACGCCCG CCGGTAGTCT GTGCCACCCG 
    CCCGCCTCAG CATCCGCCGT CATCGCCTGC GCGGCTCTGT GCCCGCTAGC 
    CACCTCGGCT ACTTCCGTGC CGTACGCCGC CTATGCCGCC CACCCACCTC 
    AGCATCCCCT ACCGTCTCCT ACGCGGCTCC ACGGCCGCTT TCGCGCCCGC 
    CAGCCGCCTG CGCACCTCCG CTCCTACTGG CCGCCCCGAC TGCTCTGCGG 
    AGTCATATTA GAGAAAAGAG CAAAGAAGGA TAGAGAAGAA TAGAGAAAAA 
    GATATAAAGA TGAAATATAG TCCTTCAAAT ATAATATATA AGTGTATGGT 
    AGTTGGAAAA TATTACTAAA ATATAGAAGG ATGTGATATG GAGAATGTAA 
    TATGTATGAT CGGTTAGAGT GGGAGGGGAA ATGAAGGAGA AATCTTTTTG 
    GATGACCATC CATTTAGGC

    Gene models with high sequence identity

    1. AT5G24960.1 [+] show detail - cytochrome P450, family 71, subfamily A, polypeptide 14
      E-value: 1e-38; Score: 158.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther CYTOCHROME P450, SUBFAMILY 71A, D 2.1e-82
    HMMPanther Cytochrome P450 2.1e-82
    HMMPfam Cytochrome P450 2.8e-32
    superfamily Cytochrome P450 2e-51
    FPrintScan Cytochrome P450, E-class, group I 3.2e-06
    FPrintScan Cytochrome P450, E-class, group I 3.2e-06
    FPrintScan Cytochrome P450, E-class, group I 3.2e-06
    Gene3D Cytochrome P450 2.7e-46

    See the detailed result >

    AT5G24960.1

    Model type
    Protein coding
    Short Description
    cytochrome P450, family 71, subfamily A, polypeptide 14
    Curator Summary
    putative cytochrome P450
    Computational Description
    "cytochrome P450, family 71, subfamily A, polypeptide 14" (CYP71A14); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily A, polypeptide 15 (TAIR:AT5G24950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR