K30842

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K30842

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K30842

Determination of introduced cDNA(s)

  • J023131N23 - Rice Full-length cDNAs - Original: J023131N23

    full reading [+] show sequence

    Nucleotide sequence: J023131N23 - full reading 
    GGCTCGCGCC CCCCAAGTCG TCGCCTAGTC ACCACCACCG CGAGCGTCTC 
    CTCCTCCTCC TCCACGCGCC GCGGCGGCGG ATTTCTTCGC CGGCGGCTGC 
    GAGCGACTCG GTACCCCGCG CCGCGCGCGG GCGCTCCTTC GATCGTGATC 
    TGGGCTGGGA GGAGGGAAGT GGGGGGTAAG GCGAGGCGAT GCAGAGGCAG 
    GGGCGGCACC TGGAGCGGTC GGGGTCGAAG CGGGCGCTCG ACGCGGGCGG 
    CGGCGGCGGG GATGACGACG ACCGTGCGCC CAAGCGGCCG CGCGTCCCGG 
    CCCTCGCGAG TGTCATTGTA GAAGCCCTCA AAGTAGACAG TTTACAAAAG 
    CTTTGTTCAT CACTTGAGCC GATTCTGCGA AGAGTTGTTA GTGAAGAAGT 
    AGAGCGTGCT TTAGCCAAAT TGGGTCCAGC TGCAACTCCT GCTAGAATTC 
    AAGGAAGGAG CTCTCCCAAA AGAATTGAAG GTCCTAGTGG TATCAATCTC 
    CAGCTTCAGT TTAGGTCTAG GCTATCACTA CCACTATTTA CAGGAGAAAA 
    AGTGGAAGGT GAGCAGGGAG CAGCGATACA TGTTGTGCTG CTGGATGCAA 
    ACACTGGACG TGTAGTCACT TCAGGACCCG AGTCGTTTGC AAAACTGGAT 
    GTCCTTGTGC TTGAGGGTGA TTTTAATAAA GAGCAAGATG AAGATTGGAC 
    TGAAGAGGAA TTTGAGAACC ATATTGTGAA AGAACGTGAA GGGAAGAGAC 
    CTCTTTTAAC TGGTGACCTC CAGGTGACTC TCAAAGAAGG TGTAGGGACG 
    ATTGGAGAGC TTATCTTCAC TGACAATTCA AGCTGGATAA GAAGCAGGAA 
    ATTTAGACTT GGTTTGCGAG TCTCTTCAGG ATTTTGTGAA GGTGTCCGTG 
    TTAAGGAGGC GAAAACGGAG GCTTTTACTG TTAAAGATCA CAGAGGAGAA 
    TTGTACAAGA AACACTACCC TCCTGCCCTA AAGGATGATG TTTGGAGATT 
    GGAGAAGATT GGAAAGGATG GTGCATTTCA CAAGAAGCTA AACTCAAATG 
    GAATATACAC AGTTGAACAT TTTCTTCAAC TTCTTGTTAG AGATCAACAG 
    AAGCTAAGAA CTATTCTTGG CAGTAACATG TCAAATAAGA TGTGGGAAAG 
    TCTTGTTGAG CATGCGAAGA CATGTGTTTT GAGTGGCAAA CACTATATAT 
    ATTACTCAAG CGATGCAAGA AGTGTTGGAG CAATATTCAA TAACATATAT 
    GAGTTCACTG GTTTGATTGC TGATGATCAG TACATTTCAG CTGAAAACCT 
    TTCTGAAAAC CAGAGGTTGT TTGCGGATAC ACTGGTGAAA CAAGCATATG 
    ATGACTGGAT CAACGTTGTC GAATATGATG GCAAGGAACT GTTGAGATTC 
    AAGCAGAAAA AGAAATCTGT CACGACAAGA AGTGATACAG CAAAGGCTTC 
    AACTAGCTAC CCTTCTTCAT ATGGTTCGAC ACACTCACAT AAACAATTGA 
    CAGGCGGACC TGTGAATATT GAGCAATCAT CTATGAGCAG TATGAGTGAA 
    GATGGAACTA GAAACATGTC CAACGGGAGC CAAGCAGCAA GATATGCAGC 
    CAATCCTCAG GACATCTCAC AAAGTATCAC CATGCCATAT GACATGAGTT 
    CATTGAGACC CGAAGAACAG TTCGCTGGTT CTTCAATCCA AACTCAAGCT 
    TCAAGAAGCT CAAACATGCT AGCCTTGGGA CCAACACAGC AGCAAAACTT 
    TGAATTCTCA GCACTTGGTC AGTCCATGCA GCCTTCTCCC CTCAATCCTT 
    TTGATGACTG GTCCCGGTTG CAGGAGAACC GTGGAGGCGT TGACGACTAC 
    TTGATGGAGG AGATACGGGT GAGGAGCCAC GAGATACTAG AGAACGAAGA 
    GGACATGCAA CAAATGCTGC GCATCCTGAG CATGGGTGGA TCATCAGCCA 
    ACATGAATCA TGGAGATGGA TTCTCCCCCT TCATGCCGTC TCCTGCACCA 
    GCCTTCAACT ACGAGGATGA CCGGGCTCGC CCGTCTGGTA AGGCTGTTGT 
    TGGGTGGCTT AAGATTAAGG CCGCTATGCG ATGGGGCATC TTTGTGAGGA 
    AGAAAGCTGC CGAGAGAAGA GCTCAGCTTG TCGAGCTGGA GGACTAGCCT 
    AGCGGAGGTC GTCCGGAGTG TTCATCTTAT GGACCATGAG GCCTGGCCAG 
    TCTGGACAGA TGGTAACACG CCTCTCTTGG CTGGTCTTGT ACAATAGTAG 
    TGTTGATATT TATGTTTACT GATGAAAGAA ATGGGCTCAG CGATGCACCA 
    GGCCAGGATG GTCCACATGA CGAGCTTATT AGTATGAAAT GGACACCCGT 
    TGTTTGTATA GCTGTTTGAT GGACATTATG TAAGTTTTGC TAGTCCGCCC 
    TGTTGTATTA CATGCAATCC TTGATCCGAA CTGTGCAAAT TTATTTGTTG 
    GAGGTTTTGG GAACACAAGT GATAGGAGGC ATGTCGCCAT CCTCTTGTCC 
    TGGACCAAAA TGGTAGTCAT AGTATACATT ATTGC

    Gene models with high sequence identity

    1. AT5G57580.1 [+] show detail - Calmodulin-binding protein
      E-value: 0; Score: 670.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G57580.1

    Model type
    Protein coding
    Short Description
    Calmodulin-binding protein
    Computational Description
    Calmodulin-binding protein; CONTAINS InterPro DOMAIN/s: Calmodulin binding protein-like (InterPro:IPR012416); BEST Arabidopsis thaliana protein match is: Calmodulin-binding protein (TAIR:AT4G25800.2); Has 341 Blast hits to 322 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 339; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR