K31431

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K31431

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased size (PATO:0000587)
    (Seed::Shape::small)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K31431

Determination of introduced cDNA(s)

  • J033034K06 - Rice Full-length cDNAs - Original: J033034K06

    full reading [+] show sequence

    Nucleotide sequence: J033034K06 - full reading 
    GATCTCCCCC CTCTTTTTTT CCCCCAAATC TCGCATCGCC TTGTCTCCCC 
    CTCCCCCCGT GCGCCTCCGA TCCGGCGCCA ATCCGCCGCG GAATCCGGCG 
    AATCCGGCGG GGGCACGGGC GCGGCGCGGC GATTTGGTCG GGGAGGCGGC 
    GCGGGGCGCT GCGGATCGAG CTCCGGGTCG ACGGATTTGG CCGCGTGGAA 
    CGGGAGCTCG ACTCGATTTT TGCGGAGGCG CGCGGTCGCC GGAGGCGGGA 
    GAGGGAGAGG GAGAGAGAGG GACGGCATAT GCGTGTGACG GTGACGCCCA 
    AGGACGAGGA GAGGCTGGTG GTGCTCATGG CGCGGGAGCG GCCGCGGTCG 
    GCGGTCGTGG CACCCGGGGG AGACCTCGTT ACGGCGGGTG GCGGCGGCGG 
    TGGGGGAGGG GGAGGGGAGG GGTCCGACGG GGACTCGTCG GGGTCGCTGG 
    AGGAGATCAG CGCCGACGAC TTCAAGAAGG AGTCGTCGGC CGCCGGCGGC 
    GCGGCGGCGG CGGCCGCGGC GCAGCAGAGA TCTAGGGTTT GGATGGGGTA 
    CAACATCCCG CGGAGCTACG CGCCGGCGTT CCACAGCTTC ACGTGGGCGC 
    AGGCCGTGCA GAACAAGCCG CTCGTGCCCC GCGCCGCCGA CGCCGCCGAC 
    GAGGACGAGG TGGAGCACGT CGTGGACACC TCGGACGAGG AGAAGGAGGA 
    GGGCGAGATC GAGGAGGGGG AGGCCGTGCA GACCACCACC ACCTCCTCCT 
    CGTCCCCGCC GTGCGCGCAG CCGCCCGAAA CCATCGACCT GGACTCCGAC 
    GCGCCGGAGA AGTCCGAGTC GATGGTGGCC ATGTATGGCG GTGGCGCCGC 
    GCCGGCCGGT GCTGAGGAGG AGGAAGTGGA CTTTGACCAG CGTGTGGGGA 
    GTATACTCGA GGAGCTTGAG ATGGTCTCCA TTGAGGAAGC TGAGAAGTCG 
    TTTGAGGGTG CATGTACGCG TCTGCGAACG TGCTTCGAGA ACCTGAAGCC 
    GTTATTCCCA GAGAGCGGGA GCCCAATGCC CATGCTTGAT GCCCTTGTGC 
    AGCAGGCGTT TGTTGGAATC GACACCATTA CCACCGTGGC AAATTCGTAT 
    GACATGCCGA AGAGGGAGCA GACCAAGAAC ATGCTTCTTA AGTTGTTATT 
    CCACATAAAA AACAGATATT CAGACATGCT AACACCTGAC CAACGAGATG 
    AGCTGGATAG CCGTGTGAGG CAGTTAGTGT TTGAGGATGG AAAAGACAAT 
    GCAAATGGTC CAAATGCCAC TTCAACTAAT GCTGCAGCTC CATCTGGTCA 
    GGTTTTATCA GAGAGACTAC CATTTGAATC AGGAGCAGGA AATTCATTTA 
    GCAAGGTTGA AATACCAGCA AAGAATAGAA TGGTTAGCCC CTTGTTGGAT 
    CTTCATGCAG ATTATGACGA AAACAGCTTA CCCTCACCAA CTCGAGATAG 
    TAAACCACCT TTTGATGTGC CAAAGCCCAT TGGATATGGA GCACTTCCAA 
    TGGCACCTGA CAGACCATCG GTTCTAGAAA GAGTTGAGCC TGCGAAGAAT 
    TCTTCGTATC AATCCTTTAA CGATGCACTG AAGGCTGTTT GCTATTACCA 
    ACAGAAGCAT GGGCAGAAGT CTAACTTTGC AAGCGATGAT CTACCAAGTC 
    CAACTCCTTC TGGTGATGGA GATAAATCTG GAGACAAAGG GGGTGATGTA 
    TTTGGTGAAG TTTCGAGCTT TTCTGCTTCA AACAAGATTG CGTTGCCAAT 
    TGTGAATCAG ATGCCCTCTC GACCTAGCAC AGTTAGCAGC AACAGTGACA 
    GTTTTGCAGG TGGTCCACCA GGTTATGCTA AACAGATTGA AAACTCTGTT 
    TCAGGATCCA ACCACCTGCT AAAAGCTACA GCTAAAAGTA GAGATCCAAG 
    GCTTAAGTTT TTAAATCGTG ATACTGGTGG TGTTGCAGAT GCAAACCGAC 
    GTGTGAATTT TGCAGAACCA AATCCTTCTA AAGATAGGAC CATGGGTGGT 
    GGAGTATCAA TCAATAGCCG TAAGAATAAG GCAGTTGATG AACCTATGGT 
    GGATGAGAAC GCGTTAAAAA GATCTAGGGG TGTCATTGGC AACCTGAGAG 
    ATATGCAACC TACAGGTCGA GGTGGGTGGG CTAAAGATGG AGGTAATATT 
    AGCTCATATT CTAGTGATGG GTTTCAGCCA AATCAAAATA CAAGACTTGG 
    AAATAACACA ACTGGAAATC ATAATATCAG GACAGATAGT ACACTTGCTA 
    GTAACTTAAA TAATACGACA AATAATAGTG GAACTAGTCC TGGAATTGTA 
    CAAGCACCCC AAACTAATTC AGCTCCGCAA ACCAGTTCTG CTCCTGCTGT 
    TTCATTGCCT GCTATGTTAA AAGACATTGC TGTCAATCCA ACAATGCTCA 
    TGCAATGGAT TCAAATGGAA CAGCAGAAGA TGTCAGCATC AGAACCTCAG 
    CAGAAGGTAA CTGCTTCTGT TGGCATGACT AGTAATGTAA CTCCTGGCAT 
    GGTTTTACCA CTTGGCAATG CTCCAAAGAC CACAGAAGTT GCAGCAGTCC 
    CTTCTGTTAG ACCACAAGTT CCAATGCAGT CAGCTCCCAT GCACTCACAA 
    AATGATACTG GAGTTATACG TATGAAACCA CGTGATCCTC GTCGCATACT 
    CCATAGTAAC ATAGTGC

    Gene models with high sequence identity

    1. AT2G33540.1 [+] show detail - C-terminal domain phosphatase-like 3
      E-value: 4e-51; Score: 200.00

     

    InterPro Scan Digest

    See the detailed result >

    AT2G33540.1

    Model type
    Protein coding
    Short Description
    C-terminal domain phosphatase-like 3
    Computational Description
    C-terminal domain phosphatase-like 3 (CPL3); FUNCTIONS IN: phosphoprotein phosphatase activity, CTD phosphatase activity; INVOLVED IN: response to salt stress; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: FCP1-like phosphatase, phosphatase domain (InterPro:IPR011947), NLI interacting factor (InterPro:IPR004274), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: C-terminal domain phosphatase-like 4 (TAIR:AT5G58003.1); Has 1686 Blast hits to 1267 proteins in 263 species: Archae - 0; Bacteria - 131; Metazoa - 483; Fungi - 269; Plants - 334; Viruses - 2; Other Eukaryotes - 467 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR