K32444

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K32444

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K32444

Determination of introduced cDNA(s)

  • J023002H11 - Rice Full-length cDNAs - Original: J023002H11

    full reading [+] show sequence

    Nucleotide sequence: J023002H11 - full reading 
    GACCTCCACC TCACCTGCGA GCAGCGGTGC CTCCTCTCCT CCTCTGCTGC 
    CTCCGCCGCG CGCATCCTCC TCCCATCCAT CTCTTCTCGG CCTCGGCGCC 
    CGTTTCCTCG CTACTTCGCC GCCTGCGCCG ATCTCCATTA ATCCATCCAT 
    CCCGCGAGGG GGAGCAGCGG GGTAGGGGTG CCGTCGTCCT GCCGCTTCCG 
    CCTCCGGACT AGGGATCATG TCAGGAAGAG ATCGTCTGCC ACGTCGCTTT 
    ATAGAGGATG GCAGGGGCTA CCCTGACATC CGTGTAGTTG ATGAACGTAG 
    GGGCTATCCT GACATCCGTG TAGTTGAGGA TCGTAGGGGC TACCATGGTA 
    TTCGTGCCAT TGAGGATCAT AGGGGCTATC CTGACATCCA TGAAGGCCTT 
    GTCATGAGGG TTGCACCTCG CTCTCACACG GCTATGCCGG AGGAAGAAAT 
    TGAGATTCAG GGGGCCGAAT TCAGGAGGCT TATGGCAGAT CACCGTGCTC 
    TTGCTGAAGA ACGTTTGGCC TTACACCGGG AATTACAAGC TGGAAAAGAT 
    GAGGTCCGTC ACTTGAACAC GATCATTGCA GACATCAGTG CCAAGAAGGA 
    AACTTATATC GGTGAGCTTG TTGACAAAAG GAGGAAACTT GAAGCTGAAC 
    TTAGAGCAAA TGAGTCTTTA AGAGATGAGA TTGTGCAGCT TCGGGGTGAA 
    ATTGATAAGC ACCTTGTAGT CAGGAAAGAG CTCTCTGCGA AGTCTGCATC 
    TATCATGCAT GAACTAACCA GGGAACAATC TAATAAACAG CAGATTCCTA 
    TGTTGAAAGC AGAGATTGAT GCCCTTCGAC AGGAACTTGT TCATGCAAGG 
    TCTGCATGTG AATTAGAGCA GAAAGGAAAT TTTCAGTTGG TTGAACAGAA 
    GAAAGCAATG GAGAAGAATA TGATTTCGAT GGCACAAGAA ATTGAACAAA 
    TGCGAGCAGA ATTAGCTAAT TCCGAAGGGA GACCATGGGC CCCAGGTGCG 
    ACATATGGGA TGAAGCTGGG CAGCCCTGAA GTGACCTTCC CTACTTCATA 
    TGGAGATAAC TACAATATCC ATGTGGGAGG TTCCGAGAAA GGTCATTCAC 
    ATCTTCCTGA ATCAAGCTCA TGGGGTACAT ATGACAACAA TCGCCTTCAG 
    TACCGTTAAG ATCGCAGCTG CTATGAAAAA AGTCCGTGAA GACTTCTGGG 
    TCCCATGGTC ATATCACATG GTTTAGATTA TCGTATCTAC CTCCTTTTTT 
    GTGGTACAAT CAATAGTTAT CTTTCTTAAT TAAAATTGAA ATGCCTCTAA 
    TCATTTTCTT CTCTGTGTGT CATATAAAAT ATGTTCCAAT GGTAACTACT 
    GCTTATACTT TGGCTCGATA CCTATATCCA AGTTTCCTTG GTTATATGGA 
    TCCATGACAC AGTTATTTTA ATATGACTTG GGTATATATA TGATATAGTT 
    TAGTTAATGA CTCAGTCATG CC

    Gene models with high sequence identity

    1. AT1G55170.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); ...
      E-value: 1e-43; Score: 174.00

     

    InterPro Scan Digest

    Program Description E-value
    Coil coiled-coil 0
    Coil coiled-coil 0
    Coil coiled-coil 0

    See the detailed result >

    AT1G55170.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 13439 Blast hits to 8993 proteins in 828 species: Archae - 344; Bacteria - 1469; Metazoa - 6958; Fungi - 1008; Plants - 683; Viruses - 29; Other Eukaryotes - 2948 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR