K32549

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K32549

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K32549

Determination of introduced cDNA(s)

  • J033044N08 - Rice Full-length cDNAs - Original: J033044N08

    full reading [+] show sequence

    Nucleotide sequence: J033044N08 - full reading 
    GGCACACGAC AAGAGAACCA AAGACACAAT CCGTACGCAC GCACACATCA 
    TGCCAATGGA GAAGAAGCAC AGGCACGCGA GGTCCAGGAG CTTCAGCGGC 
    GGCGCCATCG TCTCCTTCCT CAAGAGCACG GCGGCATCCT TCACGGCGAC 
    CACCACCACG GCCTCCGCGC CGCCGCCGCC GCACGGCAGG TCGTCGTTCA 
    ACCACCGCAA CGCCTTCTCG GGGCCCATCG TCTCCATCGT CCCGCCGGAG 
    GCGCGCGGCG GCGGCGGCGG CAGCCGCCGG GAGCACCGCT CCGGGTACCG 
    GACGCCCGAG CCGTCGTCGC CCAAGGTCTC CTGCATCGGC CAGATCAAGA 
    AGGCCAACGC CAAGAAGGTC AAGGCGAGCT GCAAGAACGG CGCGTGCCCG 
    CTCCCGCCCC GGCCGCCGGC CGACGCCGCC GCCGCGCGTA GGCAGAAGAG 
    CTCGCTCGTC AGGAGGATGC TCTTCCGCCG CAGCAGGTCG CGGAAGGCGT 
    CATCGTCGTC GTCGAGGGAC GGCGGCTTCT TCAAGGGGAG GACGGCCGGG 
    CGCGCCGGCG CCGCCGTGGC TGCGGCGCCG GCACCGGCGG GGCTCGGGCA 
    GATGAAGCGG TTCACCAGCG GCCGCGCGGC GTTCGAGGAC TTCGACTGGA 
    GGGAGGCGGA GAGGATGGCG AGTGACGACG ACGACGACGT GCTCGTCGCG 
    CACTCGGCGC CGCTCGTGCT CGGCGGCGGC CTGGTGGCGT CGGAGCCGAG 
    GAAGGAGGTG AACCTCTGGA GCCGGCGACC CATGGCTCCT CCCACTCCGC 
    TTCGACTTCC ATAGATGACG TCAGCGTGCA TGAGCTTTTG CATGCGTGTT 
    CATCGATCTG TTCGTCCATT TCTAGGCCCA AATGCGAGCG TATTCCCATT 
    CCAATGTAAT TTTTTGATTT TTTTTTGTTC TTGGAGTAAT TTGTACAGTC 
    ATATACTTCA CACGAAACTG ATCAAAAGTA CATCGATAGT TGTTTTTTCT 
    TCCC

    Gene models with high sequence identity

    1. AT1G76070.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 9e-09; Score: 58.20

     

    InterPro Scan Digest

    See the detailed result >

    AT1G76070.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20310.1); Has 66 Blast hits to 66 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR