K32948

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K32948

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K32948

Determination of introduced cDNA(s)

  • J013146D04 - Rice Full-length cDNAs - Original: J013146D04

    full reading [+] show sequence

    Nucleotide sequence: J013146D04 - full reading 
    GGCGCGGACG AGACACCTGG AACCCCCCCG ATCAAGCGGC GCGGCCTAAC 
    CTAACCCCGT GCGTCGCGTC GTCGAGAGGG GCGAAGCATC GGCGGGCCGC 
    CGACGCCGAC GAGGTCCTCC TCGGGCAACG ACGGCGAACG CGCCGGCCAC 
    CGCCGCCATG TCGAAGAAGA AGGCGGTGAC GACGATGACG CTCAAGGACT 
    TCCACGGCGG CTCCATCCCC TCCGAGCTCC CCCTCCCCTC CGCCCCCGGC 
    GTCTCCGCGC GCCCGGCGGA CCGCCCCGTG GCCTCCCAGG CGGCCGCTCC 
    CGCGGCGGCG GCCGCGGTCC CGTCGTTCCT CACCAACCCT TCCCGCATCG 
    GCCGCCACTT CGACGAGGAC GAGCGCACGC CCTTCGAGGC CGCCTCCACG 
    CCGCGCCGCC CGGCCCCGTC GCCCCCGTCG TTCGCCCCAT CCCCGGCTGC 
    GGGGCCCACC AGATCCGGGC CCGGGAACGC CTGCGGGGCC GAGGAGGGAG 
    GCGGCTCCGA CCGCGGCGCC GGTGAGTCCT GCCGCCAGCG GCGGCGGCGG 
    TGGTCAGATC TGGTCGGCGA CGCGCATTGC GCAGGCGAGC GCCGTGGAGA 
    AGGTGATCTC CGGGAGGTGG AACTCGTCGA AACCCTCCTC TCCACCGGCG 
    GCGCCTGTGT CGGTCCCAGT GGTGGTGGAG ACTCATGTTG CACCGCCGGA 
    GATGGAGAGG CCAAAGTCAG TCGGGGTGAG AGAGCTGGAT GGTGGCATAG 
    AGAGGAGCGT GGCGCCAGTG AGGCCTGCGT CGCATGAAGG CAGGGTTGGG 
    GAGGCTAGAG GCTTGGAGGT GCAAGAGAGA CCTAGGGTGG GTGATGTGCC 
    AGAGAGACCT AGGGTTGGTG ATGTGCTGCC AGAGAGACCT AAGTTGAAGC 
    TGCTTCCTCG CTCCAAGCCA ATCGAGGCTT CAGAACCATC TCCTGTCTAT 
    GTTGAAGAGA AGCAGGTGCA TCAGGTTCCA GTGGTCGCGA ATACTGTGCA 
    GGTTGACGTT ATTCATGATG TGCACCAGAA TGTTGTAGCA CCTAAAGCAG 
    GAGTAGCAGG GGCAGATGCT GAGGGCCGGG CAGTGGAGCG ACCACGATTG 
    AATCTGAAAC CCCGCTCCAA TGCAGTAGGA CAGTCTGATG AAAGTGCTCC 
    AAAGGAAAGG CAATCCCTCT TTGGTGGAGC TCGGCCCAGG GAACAAGTTC 
    TCAGAGAGCG TGGAATAGAT GCTTTAGCAA GTGACCTTGA TAAGACATCT 
    CCAGTTGGCA GGTCTAAAAG TGAATTTGCA AAGGGTGAGC AGAAGGTCGA 
    AGCTATGTCC ATTAACCCTT CAGGTGAAAA GGCTGAGAGT TTTCCAGCTG 
    GTTCTAGAGG CCCAAGGAAT GCTGATAAGA AAGACTACAG GCGGGATACA 
    GACCGGAGTG ATGTGTATAG GCCTACACGA CGGGAGGACA ACAGGAGAGT 
    TGCTAGAGAT GTGGAGAAGC CCGAGCAACA GCGTCCAGAG CCTGAAACCT 
    GGCGTAAGCC AGTTGAGCCA CCAAAGCCTG AGGTTGTTGC ACCTCGTTTT 
    GGGAAAGGAG CATCTGCATT GGAGCTTGCA CAAGCCTTCT CGAAGTCCAT 
    GTCTGATACT GTGCCTCAGA GTCGCTTGAC AAGTGTTCCT AGCCCTAAAG 
    TGCCCCAGAG TCCAGGGACC AGGGATCAGG TTGGCTTCTC AAGGCTCACT 
    GACAACCGGG CATTACACTC TAGCCCCTCG CAGCGAAAGA TTAACGGTTA 
    CTAACCTCAT TGCACATGCA CGCTGTGCTC CCATGATGGC ACGACTCAAA 
    TACCATGGCC TCGCCGAAGC GCACTGGTTT TATCTTCATG TTTGATTCTT 
    CCATCATGGG AAAAAAAAAA ATCAATTGTT GCTCTCTGGA TGGCGACACA 
    CGAGGGGTGC TGATCTCGTA ACTGGTGGCT CATTTCCACT CTTGATAACA 
    AAGAGATGAG AATTTATGAA CTATTTGTGC TTCTATTCTT CAGCCTGCTA 
    CCCGTGATTT AAGCTGGGGA ATAATTTGCA ACCTCTGTGC TGCTACTTGG 
    ATGTGCCACA TATGTTTCTG GTGTGCTTGT TTTAAGATGT TGCCAGATCA 
    GTGCTATGCC TATGTATGCA GCATATTGGT TTCCCGGTAC TTCATTAGCA 
    CGTTATACTT TCTTCTTTTC ACTATAGTAA AGGACATAAT AGTTGTTC

    Gene models with high sequence identity

    1. AT1G11480.2 [+] show detail - eukaryotic translation initiation factor-related
      E-value: 8e-22; Score: 102.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G11480.2

    Model type
    Protein coding
    Short Description
    eukaryotic translation initiation factor-related
    Computational Description
    eukaryotic translation initiation factor-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 398 Blast hits to 374 proteins in 109 species: Archae - 0; Bacteria - 21; Metazoa - 180; Fungi - 52; Plants - 82; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR