K33616

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K33616

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K33616

Determination of introduced cDNA(s)

  • J033094M06 - Rice Full-length cDNAs - Original: J033094M06

    full reading [+] show sequence

    Nucleotide sequence: J033094M06 - full reading 
    GTTAACATGG AAACCGCTGT ACTAGTGTTT GCAGGGAAGT CACTCGCAAC 
    CCCTGCAATC TCCTTCTTTG TCAACAAGGC ATTCAGCTAC CTGAACGAGT 
    ACCGCAAGGC TGAAGGATTG GAGGCCGTGA AGAACAGGCT AGAGGAGAAC 
    ATACCCAAGA TCCAATCAGT GATCGATGTC GCTGATCCTG ATTACATCAA 
    GGACAAGAGT GAAGCCCTAG ATGCATGGCT GTGGCAGCTC AGAGATGCAG 
    TCGAGGAGGC TGAGGATGCC ATCGATGAGC TCGAAGTGGA GAGGGATCAA 
    AATAAGGTTA GTCATCAGGC CGGCTCTTCT TCTTTTACAC GGATGAAGCA 
    TAAATTTGTC CAGTCTGTTA AGCATGTTAG AGTGTTGGGT ACGACATCTA 
    ATTCCCCTCT CAAGAGGTTA AAGAAAGCCT TGGAAGGTTT AGATGAGGCT 
    GCTAAAGGAG TCAAGAATTT TCTCACACTT GTACAAATTC ATCAAAACAC 
    AATATCCAAC TTAAACAATC CAGAACAAGA TGATATTAGC TTCCGTGCCA 
    AGGGGAAGGA CTTAAATGCT GATAGGGTGT TCGGTAGAGA AAATGAGAAG 
    GAACATATTG TTGGATGGCT GACCAATACA TCAAGTGAAG ATAACCAAGA 
    TGCCAAGAAC AATAATCATG TCCCCATTAT GTCAATAGTT GGCCATGGCG 
    GCATTGGGAA AACCACTTTG GCTCAGCTCA TCTCCCATGA CTCCAGAATC 
    AAGAAACATT TTGACACCGT GATCTGGGTT GCTGTATCTA TGAGCTTTGA 
    TGCAAAAACA TTGCTTGATA AAATAATTCA GTCTGTTACA TTATTAAAAC 
    CTAGTGTTGA TACCTACGAG GCACTGCAAC AGCATTTGAA AAAGGAGATT 
    GAGACCATTA AATATCTTCT AATTTTAGAT GATGTCTGGG AAGATAAGGA 
    CATCTCTAAG TGGGAAAATC TATTTTCATC TTTGAGAACA GGAGTGTGTG 
    GAAGGAAGAT TTTGTTGACA ACCCGAATGC AATCAGTTGC AGATTTAGCA 
    TCAGCGGTAA TGAGATGTGA AAGGGAGTTC TTCCCATTAT GTGGACTTGA 
    AGAAGATGAA AATTTAAGAC TTTTTAATCA TCATGCCTTC ATTAATCCAG 
    ATCCCCAAGA ATTTGAAGAC TTCCAACAAG TTGGAGAAGA AATCGCAAAG 
    AAACTAAGAG GGTGTCCCTT GGTAACTAAG GTTGTCGCTG GGCATCTACG 
    GGCACACATG AAAGTTCAAT TTTGGAATAC ATTTTTGCAT GAACATCTGG 
    ATAATTTTGA TGGAAGTATG GAAGATGTTG TCAAAGTTCT CAAGTTAAGT 
    TACTACCATT TGGTACCTGG CCTACAAGTG TGCTTCCGAT ATTGTAGCAT 
    ATTCCCAAAA AACCATGAAT TCAAAAAAGA AGAATTGGTG AAGATGTGGA 
    TAGCTGCAGG ATTGATCTCC CAGACCACAG GTGAAGCAGA GAGAGCACAG 
    GATGCTGCAG AAGAGTACTT GGATCTGCTG AATAGAAAGT CCTTCTTTGA 
    ACTCAAGTTG AGAAACTTCC GTTTCGGAAG GAACGAATGC CATGAATATT 
    TTGTGATGCA TGACTTAATG CATGATTTGG CAACATGGGT TTCTTCAGGT 
    GAATGTGCAA GAATTGCTGA TGTTGCTAGC TCCAAGAAGC TGAAACCAAC 
    AGTACGCCAC CTATCTGTTG CTGGTATTGA TGGTTTTCCA GTCGACGCCA 
    TCAAAAGTTT GTCCCAGTTC AAAAATCTGC GCACCATTAT CATTGAAGAT 
    TGCCATAATA TCCAGGATGA CACTTCACGG GAAGTGGAGA AAGTTATAGA 
    AAGCTTAAAA GCCCTGCGTG TCGTGCAATA CCACATGTTC AGTAGATCCC 
    GATTCCCTGG AAAAGAAGCT AATCTAAAGC ACCTTCGTTA TGTAAGTGTC 
    TCAATGAATT AGTATGTATA AGACCTAAAG CATGCTTGTG TTGTTTTAAT 
    TTTCTTTTTC AAATGTTTTG TGTTAAATCG TGAAATACCT TGTTGTTTGT 
    ATCGGATATG GCACTATTTG GAAGGCATGC TTGCAGTGTA ATAATAAATT 
    CAAACTTTAC ATTCTGGCAT TTGATCT

    Gene models with high sequence identity

    1. AT3G14460.1 [+] show detail - LRR and NB-ARC domains-containing disease resistance protein
      E-value: 4e-54; Score: 210.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily P-loop containing nucleoside triphosphate hyd 2.5e-18
    FPrintScan Disease resistance protein 3.7e-13
    FPrintScan Disease resistance protein 3.7e-13
    FPrintScan Disease resistance protein 3.7e-13
    FPrintScan Disease resistance protein 3.7e-13
    HMMPfam NB-ARC 1e-60
    Coil coiled-coil 0
    Coil coiled-coil 0

    See the detailed result >

    AT3G14460.1

    Model type
    Protein coding
    Short Description
    LRR and NB-ARC domains-containing disease resistance protein
    Computational Description
    LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G14470.1); Has 38623 Blast hits to 22788 proteins in 858 species: Archae - 54; Bacteria - 2838; Metazoa - 8237; Fungi - 658; Plants - 25379; Viruses - 2; Other Eukaryotes - 1455 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR