K33747

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K33747

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K33747

Determination of introduced cDNA(s)

  • J023090L01 - Rice Full-length cDNAs - Original: J023090L01

    full reading [+] show sequence

    Nucleotide sequence: J023090L01 - full reading 
    GACAGATTTT GAATTCCCCT CCTCCTCCTC GCCGCCGCCG CCGCCGCCAT 
    GTCGTCGCGG CAGGACAAGG AGAAGTCGGT GAACGTCCAG GTCCTCCTCC 
    GCTGCAGGCC GTTCAGCGAC GACGAGGTCC GCAGCAACGC GCCCCAGGTC 
    ATCACCTGCA ACGACTACCA GCGGGAGGTC GCCGTCACGC AGACCATCGC 
    CGGCAAGCAG ATCGACCGTG TCTTCACCTT CGACAAGGTG TTTGGCCCGA 
    CAGCGAAGCA GAGAGACTTG TATGACCAAG CGATTATCCC TATTGTAAAT 
    GAAGTCCTCG AGGGTTTCAA TTGCACCATC TTCGCTTATG GCCAGACCGG 
    CACGGGAAAA ACATACACCA TGGAGGGTGA ATGCAGGAGA GCCAAGAGTG 
    GTCCAAAGGG TCAGTTGCCT GCTGATGCTG GAGTCATTCC TAGGGCAGTT 
    AAGCAAATAT TTGACACACT GGAGAGCCAG AATACGGAGT ACAGTGTTAA 
    GGTCACATTC CTCGAGCTGT ACAATGAGGA AATAACTGAT CTTCTTGCGC 
    CAGAGGAGAT ATCTAAGGCT GCCCTTGAAG AACGGCAGAA GAAGCCCTTA 
    CCTCTTATGG AGGACGGGAA AGGCGGGGTG CTTGTGAGAG GCCTGGAGGA 
    AGAGATAGTT ACGAACGATG GCGAAATATT CTCTCTTTTG GAAAGAGGAT 
    CTGCAAAGCG CCGTACTGCA GAGACTCTGT TGAACAAGCA ATCCAGTCGT 
    TCACACTCCC TATTCTCAAT CACCATTCAC ATAAAAGAGG CTACTCCTGA 
    AGGAGAAGAA TTGATAAAAT GTGGGAAGCT TAATTTGGTT GACCTGGCTG 
    GATCAGAGAA TATCTCCCGT TCTGGAGCTA GGGAGGGACG AGCTAGAGAG 
    GCTGGTGAAA TAAACAAAAG CTTGCTTACT TTAGGTCGCG TTATTACAGC 
    CTTGGTCGAG CACCTTGGAC ATGTTCCTTA CAGGGACAGT AAGCTTACAA 
    GGTTGCTCCG TGATTCACTA GGAGGGAGGA CCAAAACTTG CATTATTGCT 
    ACTGTTTCAC CCTCCGTGCA TTGTCTAGAG GAAACATTGA GCACTTTAGA 
    TTATGCTCAC CGAGCAAAGA GCATCAAAAA CAGGCCCGAG GTGATCTAGC 
    TTCATTTTCT CACATCTACA GTCAATGTGC TGATAGCAGT GTGGTGTGTA 
    AACAGAACAG CTTAAAATAG TAGTAATCGC TTTATTCATA TTGGCTAAAC 
    AATTGTACAA AAACAAGTAA ATAATTCAAA TAGGAGGTGC CTAGTACATA 
    CCAAAATTAT AATGGGTTTG AAGAGTACAA GCTGAAAATT TTTATTAACT 
    CCTTAAAGCT TGTAATTGCA TAGTGTGGCC TGCTATTAAT ATATCGTTTA 
    TTTTGTATTC CAGGTAAACC AGAAAATGAT GAAATCAACA TTAATCAAAG 
    ATCTTTATGG AGAAATAGAT CGACTTAAAG CAGAGGTCTA TGCTGCTCGT 
    GAAAAGGTTG GAGTCTACAT CCCAAAAGAC AGATATCAGC AGGAGGAGAA 
    TGAGAGAAAG GCCATGGCTG ATCAAATTGA ACAGATGACT ACTTCGTTGG 
    AAGCAAATCA GAAGGTTCGT AAAGTGCTTG TTGTGTATAT TTGATATTTG 
    TTCTTGTTTA AAATTGATCT TTTGCTTGGG TTTCAGCAAA TTAATGATCT 
    TCAAGAAAAG TACGACTCAG AGCTTCAACA TTCTGCTGAT CTAAGCAAAA 
    AGCTTGAAGC CACAGAGAAA TGTCTGGACC ATACAAGCAA CTTACTATCC 
    ACAACCAAAG AAGATTTGAA ACAAGCCCAG TATAATCTGA AGGAGAAAGA 
    TTACATAATC TCTGAGCAGA GAAAAGCAGA AAATGCTTTA ATTCAACAAG 
    CCTGTCTTCT GAGATCAGAC CTGGAAAAAT CTAACCGTGA GAATGCTGCA 
    CTCTATTCAA AGATTGCTCG AGGAGATAAA CTAAATGCTG CAAATAGGTC 
    AGTGGTGAAC TCATTCCAAG CTGACCTTGC TTCAAAGTTG GATATTCTCT 
    CCACTACCCT TGCCACATCT ATAGATCAGC AAAATAAACA CCTTAAATCT 
    GTGGAGAACT TATGCAAGTC TTGTGTTGAT TCCCATGACA CGGCTACTTC 
    GGAGATAAAA AAGAAGATTT TGGCTTCAAA GGCACTTTAT ATGTCACATA 
    TGGAAGCCTT CCAAAATGTT GTGCTCCTGC ATAAAGCAAA TTCAAATTCT 
    ACACTAGAGG ATATATCATC CCTATCTGCT GCAAGCTGTT GCAGCCTTGA 
    TCAGCTTCTA GCTTGTGTCG AGGGAGAGGC ACAGAAGATA TTTGGTGATA 
    TCCAGAATTT GCTAGCTGAT CATCGAAGCG AAGTGGCACA TTTCACTCAA 
    GAGTTGCGGG AGAGTTTCCG CATTAGCTTG GATAGGACGA AGGACATGTC 
    TAGTTTCATC CTTGGGTTGT TCGATAAGTA TGTGGAGGAA ACTTCGAAGT 
    TGCAGAGCCA CTCCAATCAC ACACATGAAG CACAAGTCAA AAGCCTTGAA 
    GATTTCCAGA AGGCTTATGA GGAGCAATCA AAATCAGAAG AACAAAAGCT 
    TCTGGCGGAC ATCACCAGTT TGGTTTCTAA ACACGTTACT CGACAACGAG 
    AACTGGTGGG TGGTAGACTA AACTCTCTTG GTGACGCCGC TCGTGGAAAC 
    AAAGCATTTT TGGATGAGCA CACGTCCGCC ATGGAGGTGG TCACGAAGGA 
    CGCCAAGAGA AAGTGGGAAA TGTTTGCAGA GCAGGCAGAG AATGACTGCA 
    AAGTTGGGTC CAACTTCTCT GCAGCTAAGC ATTGTCGCAT GGAAACCATT 
    CTGCAGGAAT GTGCATGCAC CGTCGACACT GCTGCTCAAC AATGGAAAGC 
    ATCACATGCA ACTGTTAACG ATCTATGCAG AAAACAAATA GCTGAAGTTG 
    AAGCACTCGT CAGGAGTGCA ATCGAAACCA ACGAGCAGCA CGAAGCAGAG 
    ATTGCATCTT CCCGTGCCAC GGCCGAGGAG CATGCGTCCA ACAGCAGCAA 
    GGACCTACTC CAAGATGTTG ACAATATGCT GCAGGAGGCG CGCAATTCGT 
    CGTCGAGAGT GGTGTCGACG GTGGAAGCTC ATTTGGGAGA GAGCCAGCAT 
    CTACAGGAGA GCCACTCCAG CCATACCGCC GGCATCAACA CCCACGCCGA 
    CAACGCTTTC CAGAGCAGCT ACAAGGACTA CGAGCCGACC GGCGAAACTC 
    CGGTGAGGTC GGAGCCGGAG GTGCCGAGCA AAGACGCGAT CGAGTCGCTG 
    CGAGCGATGC CGATGGAGTC CCTGATGGAC GAGTTCCGCG AGAACCACCC 
    CTACGAGCCG AGCAAGGACC GCAGGCCATC GCTCATCCCT CGCTCGCCGC 
    TCGCCACCAT CAACAACTGA TGAAAATCCA TTGGAAACGC AACGCAATGC 
    AATCTGTCTC TGTGTGTGTA CTAGTGTAAT CTTATTAGCC GTAAGTAGGT 
    CATCAAATGC TGGCTTTTGG TGTCCTTTGG TTGTTGTGGC TCAGTGCCAG 
    TGCCAGTCCA GCTTCTTGTT GTGGGTTGCG AGCTATCTCA GCTTCCCCCG 
    GCGCCCTTAC CTAACTTTCT TTCACATTTT ATTATTTTGA TGTACCAATC 
    TGTTGCTTTT CTGTGTGATT ATTGGAGCTG CATAAGAGAT TTGTTGAGCA 
    TTGCATTCC

    Gene models with high sequence identity

    1. AT2G36200.2 [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
      E-value: 1e-179; Score: 627.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Kinesin, motor domain 1.2e-116
    HMMPanther KINESIN-RELATED SPINDLE PROTEIN 1.7e-18
    HMMPanther KINESIN HEAVY CHAIN 1.7e-18
    HMMPanther KINESIN-RELATED SPINDLE PROTEIN 1.5e-275
    HMMPanther KINESIN HEAVY CHAIN 1.5e-275
    HMMPanther KINESIN-RELATED SPINDLE PROTEIN 3e-34
    HMMPanther KINESIN HEAVY CHAIN 3e-34
    HMMSmart Kinesin, motor domain 2.3e-156
    FPrintScan Kinesin, motor domain 4.1e-43
    FPrintScan Kinesin, motor domain 4.1e-43
    FPrintScan Kinesin, motor domain 4.1e-43
    FPrintScan Kinesin, motor domain 4.1e-43
    superfamily P-loop containing nucleoside triphosphate hyd 8e-114
    Coil coiled-coil 0
    Coil coiled-coil 0
    Coil coiled-coil 0
    Gene3D Kinesin, motor domain 9.3e-112
    ProfileScan Kinesin, motor domain 54.682
    PatternScan Kinesin, motor region, conserved site 0

    See the detailed result >

    AT2G36200.2

    Model type
    Protein coding
    Short Description
    P-loop containing nucleoside triphosphate hydrolases superfamily protein
    Computational Description
    P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G28620.1).
    Link
    InterPro Scan - TAIR