K34043

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K34043

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K34043

Determination of introduced cDNA(s)

J023025O05 - Rice Full-length cDNAs - Original: J023025O05

full reading [+] show sequence

GACACCGATC CAGTAATCGA GCTCCAGACA TCCATCAATG GCCATGGAGC 
TCTCTAACCT GACGAGGTGC CATCTGCCAC TGCTCCTGCT CTTCCTGCTG 
GCAGGATCCT CCTCCATGGC TTTGCCAGTG CATCCTGCAA TGGACAGGGT 
GAGATGGCAG GTCGACAAGG TCAACCGGCG GGGCCATTCC ATCGGGCTCG 
TCATGTCGTA CATCGATGAG GCCACTGCTC TTGAATCCTC CGGCTGCTTC 
AGACCTTGGC ATGTCCTCCC CTTCGTTGAC CTCTACGGAC GAAGGTATCA 
CATCGGGAGT ATTAGAGGTG TCAATGTTAT ATATGCACTG ACAGGACAAC 
GCAGGTTAAA TGCGGCTGTG ACTGTACAGA CTCTCATCGA CGTCTTTACT 
GTGTCTGGCA TTGTTCATTA TGGCACAGCA GGAAGTTCTA ATGATTCAAT 
GTCATTTGGC GATGTCAGTG TCCCCAAATT TGTTGCTTAT ACAAGTGCTT 
GGACATGGAA GAAGTTCAAG TCACCAAAAG AGTCGGATAC AGAACTTAGC 
TTTGGAGATT TTACTGTCCC AAATGGAGGA GAGAATCTTC TAGGAGCTCT 
GAAATTCAGA AATGAGGAGC TATACTCAGT GGGTAAGCCT ATGAAAGAAG 
TTTTCTGGTT ACCTGTAGAT TCAGCATGGT TCAAAATCGC AGAAGGACTT 
AAGGTTTCAC TTGAAAGATG TAACGACACT TTCTGCTTGC CAACAACTCC 
AAAAGTAGTC TGTGGGCTAA AAGGATCGTC AGCTGATATG TTTCTAGACA 
ATGCAGAATA TAGGAAGTTC CTTTTCAGAG AATTTGGTGT ATCAACAGTA 
GATGAGGAGA GTGCAGCAGT GGTGATGACA ACAACATCTC CTGGCATACC 
TGTGATTGTA TTCCGGGGAG TTTCTGATTT GGCTGGAGGG GAGCCAACAT 
GGTCGTCAAC AAGCCTGATG AACCTGGCAT CTATTAATGC ACTCAAAGTG 
GCAGTGGAGT TTATTGCTAC AGTCGGGAAA CAGAAGTCAA CAATGTCAGC 
AGGAAGTGCT AATAACTGAA GGAAAAAGAT CACATCCATG CTGATCCAAT 
AATGCCCTGG AATAACATTT TACAGCAGTA GCTGCATTCA GAATAAGATG 
CTTTCCTGAG CTTCAAGTGC ATGTCCTCTC CCATAAAGGA TATTAGTGTT 
GAATTATTTT GTTGAAACTT GTAAGCATGC ATGTGCGATC ATTTTATTGC 
G

Gene models with high sequence identity

AT4G24340.1 [+] show detail - Phosphorylase superfamily protein
E-value: 6e-59; Score: 225.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Nucleoside phosphorylase	7.1e-29
HMMPanther	MTA/SAH NUCLEOSIDASE	2.4e-68
HMMPanther	Nucleoside phosphorylase, family 1	2.4e-68
Gene3D	no description	4.8e-25
superfamily	Purine and uridine phosphorylases	4.3e-34

See the detailed result >

AT4G24340.1

Model type: Protein coding
Short Description: Phosphorylase superfamily protein
Computational Description: Phosphorylase superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: nucleoside metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Nucleoside phosphorylase (InterPro:IPR000845), Nucleoside phosphorylase, family 1 (InterPro:IPR018017); BEST Arabidopsis thaliana protein match is: Phosphorylase superfamily protein (TAIR:AT4G24350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR