K34325

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K34325

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K34325

Determination of introduced cDNA(s)

  • J023003G19 - Rice Full-length cDNAs - Original: J023003G19

    full reading [+] show sequence

    Nucleotide sequence: J023003G19 - full reading 
    ACACCAATCC GCCATGGCTA GTGTTCTCGC CGTCCCCCTC CTGCTGTGCC 
    TGCTCGCCTC CGCCTCCGCC GCCCGCTTCG CCCCGGCGGA CAACCACCTC 
    CTCGCCTGCG GCGCGACGGC ACCGGCCGTG CTCCCCGACG GCCGACGCTT 
    CGTCCCCGAC TCCGGCTGCG CCTCCACGCG CCTCCGCTCC CCGGCACCTA 
    CCCTCCACTT CTACCCCTTC GAGCCCGCGC TCGCGTCCGC GCGCTTCCAC 
    GTCGGCGCCG CCGGATTCCT CCTCCTCCAC AACTTCTCCG CGTCGGCCCC 
    CGTCGTGAAG GAGTTCATCC TACACGTCCA CTCCGACGTC CTCGTCCTCA 
    CCTTCGTCCC CGAGTCGGGC TCTAACGCCT TCGTCAACGC CATCGAGCTC 
    GTCTCGGCCC CCGATGAGCT CGTCGGCGAC ATCGGCACCC TCGTCACGAG 
    CAGCGGCACT GACCAGACCA ATGGATTGTC GTCTCAGGTC TATGAGATGC 
    TCTATCGGAT CAACGTCGCC GGCCGCAAGG TCACACCGTT CAACGACACG 
    CTGTGGCGAA CATGGGTCAA CGACGAGCGC TTCCTCGTCA GCACGGAATC 
    ATCCAACAGC GGGGTCTGGT CGTTCGGTGG CCGGATTGCT TATCCCAAGG 
    GTAGCAGATT GATGACACGG GAGGTTGCTC CTGACAACGT GTACAACTCG 
    GCGAGGTCAG TGAGCTCACA GGGCAAAGTG ACATGGGGAT TTCCCGTGCC 
    TGCTTCCAGC AGGTACCTAG TGCGTATGCA CTTCTGTGAC ATCGTGAGCA 
    AGGCTCTAAA TGAGCTTTAC TTTGATATCT ATGTCAATGG TCAGCTAGCA 
    GTAAAGGATT TCGATATCTC TGGTGCCACT GGATTCTTAG CCTATCCATA 
    TTACATCGAC TTTGTTGTGG ATGTTGAGGA TGAAGGGGCC CTGAAATTGG 
    CCATTGGTGG CTCGAAGAAT AGCCGATCAG ACGAAGTGAG CGGTATTCTT 
    AATGCTGTAG AGATAATGAG GATGAACAAA ACAAATGGTG GTATTGATGG 
    GGATTTTGCA GTTTCTCTGG GCATGGAGTA TGTGGCTAGC AAGGGGATCG 
    GAGAATTTAC TCGCTCACTG CTGTGTGGTT TCATTTTTGC GGGATTGTTG 
    TTGGTTTTGT TAATGCTTGT GGGGAGGTTG AGGACTGAGC TGAGGAATAA 
    TGGTACAACT TGGTCTTGGC AGCCAAATGA TTCTGGTGAC GGGAAGCTGG 
    CTAGAGCATA TCAACTTGTG TCCGCTAAGA CAGACTATTG AACATCATGA 
    GATGATAATC TTTGAGGAGC TTTAAACTGT GGCTGTTGAC CTATTGTATG 
    TAATGACATA TTGCATTACT TCAGTTGTAA GTATTGTAGT TTTACACTTT 
    TACTCCCTTA ATGGTAAGTT TTCGGTTATT TGAGCTTGGC TAATGGAGAA 
    AACGGTCGTG GTGTTGTATC TGGCTCAAGA TATTTGTTTG TATTAGTACT 
    GCTTTTAATA GCTCTATCCA GTTTGTGATG CTTGAATG

    Gene models with high sequence identity

    1. AT4G00300.2 [+] show detail - fringe-related protein
      E-value: 3e-68; Score: 256.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G00300.2

    Model type
    Protein coding
    Short Description
    fringe-related protein
    Computational Description
    fringe-related protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Malectin/receptor-like protein kinase (InterPro:IPR021720); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G24010.1).
    Link
    InterPro Scan - TAIR