K34448

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K34448

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K34448

Determination of introduced cDNA(s)

J013119D13 - Rice Full-length cDNAs - Original: J013119D13

full reading [+] show sequence

TCTCTCTCTA CCATACCAAG GAGAGCCATA GCCTCTCTCT CTCTCTCTCT 
CTCTAGATAT CTCTCTCTTT TTCTCTCTAG ATCTCTCTTT TTTCTTGTAT 
CTCTATAGGT TGTTAGAGCG GCGACGGCGA GAAGAGGAAG GAGCAACAAG 
GAGTAGATCA TCAGTATAGA GAGCAGCAGC AATTTGGGAA GGTTCATTAT 
TACAGCTCTG TTGTTTCATT TCTTTGAGGA GACGAAGTTA GCAAGCAGGG 
ATTGCTGTTT CTGAATTTCA AGGAGAAGAT AACAATAGCA AATGATGATG 
TCATCTGGGT TCCAGCTCGG TGTGATCGGG TCTCTTGCGC TGTCGGTTGC 
ATCATCAGTT GCCATTGTCA TCTGCAACAA AGCTCTCATC AGTACCCTTG 
GTTTCCCTTT CGCTACAACA TTGACAAGCT GGCATCTCAT GATGACCTTC 
TGCACCCTCC ATGTGGCACA ACGCTTGCAT TTCTTTGAAC CAAAGGCAAT 
TGATGGGCAA ACAGTGATCC TCTTTGGGTT GCTGAATGGC ACCTCAATTG 
GCCTTCTCAA CCTTAGTTTA GGATTCAACT CCATTGGATT CTACCAGATG 
ACAAAATTGG CGATCATACC TTTCACTGTG CTGTTGGAGA CAATCTTCCT 
GAAGAAAAGA TTCAGCGAGA GTATCAAGCT TTCTCTACTG GTCTTACTTC 
TTGGAGTGGG CATTGCTTCA GTTACTGATC TCAAGCTAAA TCTACTTGGA 
TCCGTCCTTT CTGGACTCGC CATCGCGACC ACTTGTGTTG GGCAAATTCT 
CACAAATACA ATACAGAAGA GATTGAAGGT ATCCTCAACG CAGTTACTCT 
ACCAATCTGC ACCTTACCAG GCAGCAATTT TGTTTGCGAC TGGCCCTTTT 
GTAGATCAAC TCCTTACGAA CCGCAGTGTC TTCGCCCACA AGTACACCAC 
TCCAGTTTTG GTATCTTCTT AACAAACTCC ATCCATTTAC AATTATATGA 
AAATGCTTTA TAGTTGCCAG GATGCAAGCT AAATTACTTT GTGGAATATA 
ACAATTCATC ATTTCTTAGA TCTTCAAGAT TACTAGAGGC GCTAAGGTGA 
CAAATATATT TGCTGCTTCC ATAATAACTA GCCAAGAAGT CTAAACATAA 
GATTAGAATA TAATTTCATG ATCCACCCAT TGTATTATAT TTCCCATCTT 
GAAATTGATA TGTCCTAAAA GTATGTTTAA AACATTATTA TATGCTTTTC 
AAGGGAAGAA TAACCAGTGG TATGAAGAAG AAAAGGACGC AATATAAAAT 
TGATCAGTGG GCAACTAAAT GCCAAACACA TAAAAGTTCC TTGTATGCAA 
TGTTTTTCCA GTACTGAGAA AATATACAAT GATATGTATG GAAGTAGACA 
AAAAGTCCAA TATGATTGTA GCTTGCAATG TTGTTGATAT AATGCATCAT 
CATTTCTTAG ACACTGTCAA TCAGTTATCA TGCTCAAGAG TGACTCAGGA 
GTTTGCACAT CTATTTAGCA TTGGCAAATG CTCCCAGATA TGCAGATATA 
CCATAAATTT GGATAGGAAA ATGGCATGCA AAATGATGTT TTGAATTATG 
AATTATATGC AGGGTTTCAT CATGCTATCT TGTTTGATTG CGGTGTCTGT 
GAACTTCAGC ACATTTCTTG TGATTGGAAC AACATCTCCA GTTACATACC 
AGGTGCTAGG CCACCTTAAG ACATGTCTCG TTCTCTCATT TGGATACATT 
CTGTTACACG ATCCTTTCAA CGCAAGGAAC ATATTAGGAA TTTTGATCGC 
CATATTTGGG ATGGGATTGT ACTCCTACTT CTCAGTGAAG GAGGGCAAGA 
AGAAGGCAAC AAATGATCCA CTGCCAGTTT CACAGATGCC AGAAAAGGAG 
ACTGAACCAC TTTTGGCAAC CAAAGACAAC AGTGATACCA AAAAAGCAAA 
TGGTGTATCT CATGACTGCT AAGACTTCTC TTGCTTAGTG TAGATCTAGT 
ATATGCACAC TGCATGCCTG CTCGTTGAAT TTGAAGGACC TGGAAAGCCA 
TTTCTTTCCA TTCTTGATTG TTTTGTAGAA AAGATAAATG AGTTTTATAC 
TTGTAGAGAG TGTATATTTT GACATTAAAA TTATCATTTG ATCCTACTTT 
C

Gene models with high sequence identity

AT2G28315.1 [+] show detail - Nucleotide/sugar transporter family protein
E-value: 1e-76; Score: 284.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	SOLUTE CARRIER FAMILY 35	6.6e-47
HMMPanther	SOLUTE CARRIER FAMILY 35	3.9e-29
HMMPfam	Protein of unknown function DUF250	7.3e-05
HMMPfam	Protein of unknown function DUF250	7.7e-21

See the detailed result >

AT2G28315.1

Model type: Protein coding
Short Description: Nucleotide/sugar transporter family protein
Computational Description: Nucleotide/sugar transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G06890.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR