K35013

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K35013

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K35013

Determination of introduced cDNA(s)

J023111D06 - Rice Full-length cDNAs - Original: J023111D06

full reading [+] show sequence

GATATCCTCC ATCCCGCGGC GGCCGTGAGC ACCAACACTC ACGCATTCCT 
TCCTACTCCG CGAGATCTCC GGATTCGTTT CGGTGTTTTG CGAGTCGCGC 
CCGGAGAAGA GGAGAGGAAA TCCGGTCAAT CGCGGCGTCG GCGTGCCGTC 
GCTTGGGGTG GTGTTGGTGG TTCTGAATTT TGATTGCTTC GTGCTTTTCG 
TTTGGGGGAG GGCAGTGGTC GCCATGGGAT TGGGGAACGA GGCGAGCTCG 
TCGTCGTCGC GGCTGCTGGA TCCGGCGCCT CTGCTGCCGC ACCACGGTGG 
AGATGGCGCC GGGAAGCTGT CGTCGCAGCC CAAGACCTTC GCGAACGTCT 
TCATCGCGGT GGTCGGCGCC GGCGTGCTGG GGCTGCCGTA CACGTTCTCG 
CGGACCGGGT GGGCGGCGGG GTCCATCCTC CTGCTCTCCG TCGCGGCGCT 
CACCTTCTAC TGCATGATGC TGCTCGTCGC CTGCCGCCGC CGCCTCGCCG 
ACGAGCACCC GAAGATCGCC TCCTTTGGGG ACTTGGGGGA CGCCGTGTTC 
CGCGGTCCGG GGCGCCTCGC CGTGGACACC ATGCTGGTGC TCAGCCAGGC 
CAGCTTCTGC GTCGGGTACC TCATCTTCAT CTCGAACACC ATGGCGCACC 
TTTACCCCGT CTTCGCGCCC TCCTCCAACG CGCTCCTCTC CCCAAAGGCG 
CTCTTCATCT GGGCCATGCT GCCGTTCCAG CTCGGGCTCA ACTCCATCAA 
GACGCTGACG CTCCTCGCGC CGCTCAGCAT CTTCGCCGAT GTGGTTGACC 
TCGGCGCCAT GGGCGTCGTT CTCGGGGAGG ACGTGTCCGT CTGGCTCGCC 
AAACCACCAC CCGTCTTCGC CTTCGGCGGC CTGAGCGCGA TCCTGTACGG 
CATCGGCGTG TCCGTGTACG CCTTCGAGGG AATCGGCATG GTCCTTCCGC 
TTGAGGCGGA GGCCGCCAAC AAGAAGAAGT TCGGGACCAC GCTCGGGCTA 
TCCATGGGGT TCATCGCCGT CATGTACGGC CTGTTCGGCG CCATGGGGTA 
CATCGCTTTC GGCGACGCCA CGCGCGACAT CATCACCACC AACCTCGGGA 
CCGGGTGGCT CTCGGCCGCC GTGCAGCTCG GGCTGTGCAT CAACCTCTTC 
TTCACCATGC CGGTGATGAT GCACCCCGTG TACGAGGTCG CCGAGCGGCT 
GCTCCACGGC AAACGCTACT GCTGGTGGCT GCGGTGGCTG CTCGTCCTGG 
CCGTCGGCCT CTCGGCCATG TACGTGCCCA ACTTCACCGA CTTCCTGGCG 
CTCGTCGGGA GCAGCGTCTG CGTCCTGCTC GGCTTCGTGC TGCCGGCCTC 
GTTCCACCTC AAGGTGTTCG GCGCCGAGAT GTCCTGGTCC GGGGTGCTCA 
GCGACGTCCT GCTCGTCCTG CTCGGCCTCT CGCTCGCCGT CTTCGGCACC 
TACACGTCCC TGCTGCAGAT CTTCCATTCC TCCAGCGCTT AATCTCTGGA 
GAATCTTTAC GGATAGCTGC GCCGATGATT GATTTGCTCA TTTGCTTCGC 
GCGCGGGTGT CAGCCTGTCA GGTACGCTGG TTGCATTCTT CGTGTACAGA 
GAAGGTGATC GGTCGATCAG AGGGGCAATG CCCAATTCAG CTTGCTGTTG 
ATTTGGGCAT GGACAGCGTG CATCGGCCGC ATTCTTTCGA TTACAAGTCA 
GATGGTTTGT ACAAGTTAGC GTGGATGGCA TGGAGAAATC TGTATGGTTT 
TGCAACGACA GATTCCCATA GCTACTCGTG TCAGTTAATA TTTATGTGTA 
TGTCTTGGAT GTTTCAGCTG CTGCATTGCA CGGTGGAATC GATGAAAGGA 
CATAGTAAGT TTCAGTCTAA GTTTAAGCCT ATTTAGTTGA TAAATAAAGT 
GTCTAGTTGA GGTTGCAGCT TGTGTGCGGT ACTGCGGGTT GTGTCAATTA 
GGAAGGCAAG CAATCGGGAC GACTTGGCAA AGTATACATT CTATTCTGTT 
CATTCTGTTT TGTCCCAAGC AAGTAAACTT GTAATGCCCC AACTACCAAT 
CGAAATATCG AATCTTCTTT CAGCTTGCCT GTTATTACC

Gene models with high sequence identity

AT4G38250.1 [+] show detail - Transmembrane amino acid transporter family protein
E-value: 1e-127; Score: 454.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Amino acid transporter, transmembrane	4.8e-68
HMMPanther	AMINO ACID TRANSPORTER	6.6e-88

See the detailed result >

AT4G38250.1

Model type: Protein coding
Short Description: Transmembrane amino acid transporter family protein
Computational Description: Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT2G42005.1); Has 5006 Blast hits to 4918 proteins in 286 species: Archae - 16; Bacteria - 54; Metazoa - 1812; Fungi - 943; Plants - 1365; Viruses - 6; Other Eukaryotes - 810 (source: NCBI BLink).
Link: InterPro Scan - TAIR