K35109

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K35109

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K35109

Determination of introduced cDNA(s)

  • J033098O09 - Rice Full-length cDNAs - Original: J033098O09

    full reading [+] show sequence

    Nucleotide sequence: J033098O09 - full reading 
    GAGCTTTTAA CTGCTCGTCT CATCACTCTC CACCTCTCTC CCTCTCTCTC 
    TCTTCCTCGC GCTCCCACGC CACGCAGCAG CCGCAGATCT CCACCCGCCT 
    CCGGCGAGCC CGCCGCCGCC GCCGCCGCCA TGGAGTACGA GCGCATCGAG 
    AAGCCGTTCC CCACCCAGGG CGGTGGGTTC TCGCCGAAGC GGCTGCGCGC 
    GATGTTGCTG GGGGTGGAGA AGCGGCGGAA GGGGCAGGAG GAGGAGGAGG 
    AGGGGGACGC CGGGGAGGTG GACGACGAGT ACGGCGCGGT GCCCAAGTCC 
    TCTGTCAGAT CCGACGCCGA CTCCGATGCG CGCAGAGGAG GTAGCATGTG 
    CGAAGAATAC AAGGATGTAG ATGTGGTGAG CACCATCTCA GAATCTTCAT 
    CCTCGTTGGA GACAGGGAGT GGGCACCGAT CGCGTGACAC CCACTCCATG 
    GGTTCACGAG TAAGGGTGCC TGAGGAGGAC TCCTGTGACT CTGAGAGTGT 
    GGCTTCAAAC TTTGAGTTCC ATAAGGAGCG AGGGGCCTCT GCTCGGTCTG 
    TGACGGCGGC AATCGTTCCT CCATTCTCAA AGCCTGCACC ATCAAAGTGG 
    GACGATGCCC AGAAATGGAT CGCCAGCCCG ACAACAAACC GTCCTGGTAG 
    GGCTGGTGGA GTGCCACAGA GGAAGATGGA AAAAACTAGC TTTGGTGGCG 
    GGAGGCTGCC GGCTACGAAG GTTGTGTTGG AGGCCACAGA GGAGATAGAT 
    ACTAAGAGGG TTGATCCAAG CCAAGAGAAA AGGGAAATTG GGTGGCAAAA 
    AGCGGTGAAT TGGGCCCCAC CTGATCCATA TCCAGAAGTT GAGACTTGTG 
    CAAAGTCTGC ACTTGCTGAA GAAATTACAG TAGCTGATTC AGCTGTTACT 
    TTTAGTCGCC ATGATTCATC TGCCACGCTT CAGAGCGCGA CAACATGCAT 
    ACCTCCCCCA CCAACAGTCC GATCAGTGTC AATGAGAGAC ATGGGTACAG 
    AAATGACCCC TATTGCGAGC CAGGAGCCAT CCCGAACAGG AACACCGGTG 
    AGAGCAACGA GTCCAGATTG TTCTCGCCCA ACTACTCCAC GAAAAACAAT 
    AGGCCCCAAT GCAATCGGTG CTGTTATTGG CCATGGTGAA TGTAGCAACG 
    TGGAATTAAG TGAACAAGAA TTGCAAATGA AGACTAGGAG GGAGATAATG 
    CTCCTCGGCA CTCAGCTTGG TAAAACCAAC ATTGCTGCAT GGGCAAGCAA 
    CAAGGAAGAG GAAAAAGATG CATCACTTTC GCTTAAAGGA GTGCCCATGG 
    ACCAATCTAC ACAGAAGGTA ACAGAAATTC GTGCAGCAGC GTGGGAGGAG 
    GCAGAGAAGG CTAAATATTT AGCAAGATTT AAACGAGAAG AGATTAAGAT 
    CCAAGCATGG GAAGATCATC AGAGAGCAAA AATCGAAGCT GAAATGAGAA 
    AAATTGAGGT CGACGTGGAA AGGATGCGAG CCCGTGCGCA GGACAAGCTG 
    ATGAGCCAGC TCGCATCGGC GAGACACACT GCCGACGAGA AGCGGGCCGC 
    GGCGGAGCTG AAACGGAGCC GTGCGGCTGC AAAGACGGCG GAGCAGGCAG 
    ACCACATCAG GAGAACCGGC AGGATGCCGT CCTCCATTGG CTGCTGGAAC 
    TGGTGCTCGT AGTAGCGTAG CTAAGCTCAA GCAACTGAAG CAAGCAAAAA 
    GCTCTCCTCA CTATGTCTCG CAAGACTTGA AGCGCCATCA TCTGTTTTTA 
    CCGTGATCTT GTAGAATATT GTCTTTTGAT TGGTTTCAGT AGATATAAGT 
    CAGAAGAAGA CGAGTCACTT GTAAGTAACT ATGGAGCAGT ATATAAGATG 
    CAAGCTTCTT GCCTTTTTCT GTGC

    Gene models with high sequence identity

    1. AT2G02170.2 [+] show detail - Remorin family protein
      E-value: 9e-88; Score: 321.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Remorin, C-terminal 1.4e-36
    Coil coiled-coil 0

    See the detailed result >

    AT2G02170.2

    Model type
    Protein coding
    Short Description
    Remorin family protein
    Computational Description
    Remorin family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT1G30320.1); Has 3690 Blast hits to 2594 proteins in 496 species: Archae - 6; Bacteria - 904; Metazoa - 645; Fungi - 344; Plants - 595; Viruses - 5; Other Eukaryotes - 1191 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR