K35622

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K35622

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K35622

Determination of introduced cDNA(s)

J023113D08 - Rice Full-length cDNAs - Original: J023113D08

full reading [+] show sequence

GGAAACCCAA GCAAACCAGC AGCTACTAAG CAAAGCACAA CCAAAGCTTA 
AGCTTCCTCC AAATCCTCAC ACAAGAACTC GCTCTTCTTA ACCCTCCCGG 
ATTTTCTCCG ACGAGATCGA TGGCTCCTCC CCAGCTTGCC GGCAAGATGA 
CCGCCAAGGC CGCCGCGGCG GTGAAGCCCG CGACGAGGGC GTACGTGACG 
TTCCTCGCGG GCGACGGTGA CTACTGGAAG GGCGTTGTCG GGCTGGCCAA 
GGGCCTTCGC AAGGTGGGCT CGGCCTACCC GCTGGTGGTC GCCGTCCTCC 
CCGACGTGCC GGAGTCCCAC CGCCGCATCC TCATCTCCCA GGGCTGCATC 
GTCCGGGAGA TCGAGCCGGT GTACCCGCCG GAGAACCAGA CGCAGTTCGC 
CATGGCCTAC TACGTCATCA ACTACTCCAA GCTCCGCATC TGGGAGTTCG 
TGGAGTACGA GAGGATGGTG TACCTTGACG CCGACATCCA GGTGTTCGAC 
AACATCGACG AGCTGTTCGA GCTGCCCAAG GGGCACTTCT ACGCGGTGAT 
GGACTGCTTC TGCGAGAAGA CGTGGAGCCA CACCCCGCAG TACCAGATCG 
GCTACTGCCA GCAGTGCCCC GACAAGGTGG CGTGGCCGAC CGCCGAGCTC 
GGCCCGCCGC CGGCGCTCTA CTTCAACGCC GGCATGTTCG TGCACGAGCC 
CAGCATGGCC ACCGCCAAGT CCCTGCTCGA CACTCTGCGC GTCACCACGC 
CCACTCCCTT CGCGGAGCAG GATTTCCTGA ACATGTTCTT CAGGGAGCAG 
TACAAGCCGA TCCCACTGAT CTACAACCTT GTCCTGGCCA TGCTCTGGAG 
GCATCCAGAG AACGTCCAGC TCGAGAAGGT CAAGGTCGTG CACTACTGCG 
CAGCGGGATC GAAGCCGTGG AGGTACACGG GCAAGGAGGC GAACATGGAC 
AGGGAGGACA TCAAGATGCT GGTCAAGAAG TGGTGGGACG TCTACAACGA 
CGGCAGCCTG GACTTCAAGG GCCTCCCGCC CATCGCGGCC GCCGACGACG 
CCGACGAGGT CGAGGCGGCG GCCAAGAAGC CGCTGCGCGC CGCGCTGGCG 
GAGGCCCGCA CCGTCAAGTA CGTCACGGCG CCATCGGCCG CGTGATCGTA 
CGGCCACTGT CGCTTCCCTC CGGTGCCCGG GCGTCCGGCT CCGGCGGCGT 
ACCTCTGCAT CCCGTATCTT GGTATTTTTT TAGGATGTCC AATTTGGGAT 
CAGTATGTTC CTTCTAGTAC ACTTCACAAA TGTAACGAGG CTTGTTTAGA 
ATACGTATGC TGTGGATTTT GTGAATATCT GTTCCTTTTG AGTCAAAACT 
CAACCAGTGT GATCTTTGTA TTTTGTGGAA ATCGATATAT CATAGGAAGT 
TGCT

Gene models with high sequence identity

AT2G47180.1 [+] show detail - galactinol synthase 1
E-value: 6e-142; Score: 501.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	GALACTINOL SYNTHASE-RELATED	8.8e-202
HMMPanther	GLYCOGENIN	8.8e-202
HMMPfam	Glycosyl transferase, family 8	2.3e-67
superfamily	Nucleotide-diphospho-sugar transferases	2.2e-65
Gene3D	no description	2.8e-76

See the detailed result >

AT2G47180.1

Model type: Protein coding
Short Description: galactinol synthase 1
Computational Description: galactinol synthase 1 (GolS1); FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: response to high light intensity, carbohydrate biosynthetic process, response to hydrogen peroxide, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galactinol synthase 2 (TAIR:AT1G56600.1); Has 1198 Blast hits to 1197 proteins in 285 species: Archae - 0; Bacteria - 104; Metazoa - 258; Fungi - 278; Plants - 420; Viruses - 71; Other Eukaryotes - 67 (source: NCBI BLink).
Link: InterPro Scan - TAIR